PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
BhybBhD40318310.1 Rosmarinic Acid C4H low borderline
BhybBhD40320430.1 Rosmarinic Acid C4H medium pass
BhybBhD40320450.1 Rosmarinic Acid C4H medium pass
BhybBhD40320860.1 Rosmarinic Acid C4H low borderline
BhybBhD40320870.1 Rosmarinic Acid C4H medium pass
BhybBhD40323720.1 Rosmarinic Acid C4H low borderline
BhybBhD40326650.1 Rosmarinic Acid C4H low borderline
BhybBhD40326720.1 Rosmarinic Acid C4H low borderline
BhybBhD40327720.1 Rosmarinic Acid C4H low borderline
BhybBhD40330280.1 Rosmarinic Acid C4H low borderline
BhybBhD40331390.1 Rosmarinic Acid C4H medium pass
BhybBhD40332050.1 Rosmarinic Acid C4H low borderline
BhybBhD40332060.1 Rosmarinic Acid C4H low borderline
BhybBhD40334650.1 Rosmarinic Acid C4H low borderline
BhybBhD40334690.1 Rosmarinic Acid C4H low borderline
BhybBhD40336820.1 Rosmarinic Acid C4H low borderline
BhybBhD40338340.1 Rosmarinic Acid C4H low borderline
BhybBhD40338340.2 Rosmarinic Acid C4H low borderline
BhybBhD40338350.1 Rosmarinic Acid C4H low borderline
BhybBhD50340240.1 Rosmarinic Acid C4H low borderline
BhybBhD50340860.1 Rosmarinic Acid C4H low borderline
BhybBhD50340900.1 Rosmarinic Acid C4H low borderline
BhybBhD50341740.1 Rosmarinic Acid C4H low borderline
BhybBhD50343430.1 Rosmarinic Acid C4H medium pass
BhybBhD50344680.1 Rosmarinic Acid C4H medium pass
BhybBhD50344780.1 Rosmarinic Acid C4H low borderline
BhybBhD50344930.1 Rosmarinic Acid C4H low borderline
BhybBhD50345940.1 Rosmarinic Acid C4H low borderline
BhybBhD50348560.1 Rosmarinic Acid C4H low borderline
BhybBhD50350390.1 Rosmarinic Acid C4H medium pass
BhybBhD50351420.1 Rosmarinic Acid C4H medium pass
BhybBhD50353680.1 Rosmarinic Acid C4H medium pass
BhybBhD50356900.1 Rosmarinic Acid C4H low borderline
BhybBhD50357660.1 Rosmarinic Acid C4H low borderline
BhybBhD50365330.1 Rosmarinic Acid C4H low borderline
BhybBhD50368480.1 Rosmarinic Acid C4H low borderline
BhybBhD50368620.1 Rosmarinic Acid C4H low borderline
BhybBhD50368630.1 Rosmarinic Acid C4H low borderline
BhybBhD50368640.1 Rosmarinic Acid C4H medium pass
BhybBhD50368650.1 Rosmarinic Acid C4H low borderline
BhybBhD50368670.1 Rosmarinic Acid C4H medium pass
BhybBhD50368680.1 Rosmarinic Acid C4H low borderline
BhybBhD50368710.1 Rosmarinic Acid C4H low borderline
BhybBhD50371210.1 Rosmarinic Acid C4H low borderline
BhybBhD50374250.1 Rosmarinic Acid C4H low borderline
BhybBhS100422580.1 Rosmarinic Acid C4H low borderline
BhybBhS100425710.1 Rosmarinic Acid C4H low borderline
BhybBhS100425810.1 Rosmarinic Acid C4H low borderline
BhybBhS100428000.1 Rosmarinic Acid C4H medium pass
BhybBhS100428030.1 Rosmarinic Acid C4H low borderline