PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3404
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAS
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Gene Pathway Family Confidence Status Best Target
BhybBhS40547660.2 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
BhybBhS40553920.1 Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
BhybBhS40553930.1 Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
BhybBhS40553950.1 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
BhybBhS40553960.1 Steroid CAS medium pass CAS__00011__sp_Q8W3Z4_CAS1_BETPL
BhybBhS50583510.1 Steroid CAS medium pass CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
BhybBhS60612750.1 Steroid CAS medium pass CAS__00010__sp_Q8W3Z3_CAS2_BETPL
BhybBhS60612760.1 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
BhybBhS70619620.1 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
BhybBhS70630650.1 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
BhybBhS70630650.2 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
BhybBhS70630650.3 Steroid CAS medium pass CAS__00014__sp_Q9SXV6_CAS1_GLYGL
BhybBhS80664970.1 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
BhybBhS90672600.1 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
BhybBhS90672960.1 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
BhybBhS90673940.1 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
BhybBhS90673940.2 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
BhybBhS90673970.1 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
BhybBhS90680160.1 Steroid CAS medium pass CAS__00007__sp_Q43153_CYSC_SPIOL
BhybBhS90693370.1 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
BhybBhS90693370.4 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
BhybBhS90693420.1 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
BhybBhS90693420.2 Steroid CAS low borderline CAS__00003__sp_H8ZM73_CAS_ABIBA
BhybBhS90693420.3 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
BhybBhS90693510.1 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
BhybBhS90693510.2 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA
BhybBhS90693510.3 Steroid CAS medium pass CAS__00003__sp_H8ZM73_CAS_ABIBA