PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP71
Reset
Protein/Isoform Record Pathway Family Confidence Status Best Target
BhybBhS50581770.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
BhybBhS50582460.1 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
BhybBhS60604970.1 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
BhybBhS60612080.1 Terpenoid CYP71 low borderline CYP71__00001__sp_Q8W4D0_CPY71_ARATH
BhybBhS60612080.2 Terpenoid CYP71 low borderline CYP71__00001__sp_Q8W4D0_CPY71_ARATH
BhybBhS60612710.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
BhybBhS70620670.1 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
BhybBhS70625850.1 Terpenoid CYP71 low borderline CYP71__00001__sp_Q8W4D0_CPY71_ARATH
BhybBhS70638180.1 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
BhybBhS70643550.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
BhybBhS80658130.1 Terpenoid CYP71 low borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
BhybBhS80658140.1 Terpenoid CYP71 low borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
BhybBhS80659020.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
BhybBhS80659060.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
BhybBhS80672020.1 Terpenoid CYP71 medium pass CYP71__00001__sp_Q8W4D0_CPY71_ARATH
BhybBhS90673950.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
BhybBhS90674180.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
BhybBhS90675410.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
BhybBhS90676920.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
BhybBhS90681200.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
BhybBhS90693380.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
BhybBhS90693400.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
BhybBhS90693410.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
BhybBhS90693430.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
BhybBhS90693440.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
BhybBhS90693460.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
BhybBhS90693470.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
BhybBhS90693480.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO
BhybBhS90693500.1 Terpenoid CYP71 medium borderline CYP71__00002__sp_W8JDE2_C71Y1_CATRO