PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Protein/Isoform Record Pathway Family Confidence Status
BhybBhS30487160.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS30505630.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS30505640.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS30506630.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS30510660.1 Steroid DWF4/CYP90B1 medium borderline
BhybBhS30512290.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS30512410.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS30512410.2 Steroid DWF4/CYP90B1 low borderline
BhybBhS30517590.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS40526490.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS40527070.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS40530520.1 Steroid DWF4/CYP90B1 medium borderline
BhybBhS40548630.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS40548630.2 Steroid DWF4/CYP90B1 medium borderline
BhybBhS40550280.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS40550300.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS40551440.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS40552290.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS40553410.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS50558030.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS50558830.1 Steroid DWF4/CYP90B1 medium borderline
BhybBhS50571300.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS50578760.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS50579580.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS50582920.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS50587260.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS50589430.1 Steroid DWF4/CYP90B1 medium borderline
BhybBhS50589430.2 Steroid DWF4/CYP90B1 medium borderline
BhybBhS50589440.1 Steroid DWF4/CYP90B1 medium borderline
BhybBhS60591390.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS60591830.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS60600570.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS60617440.1 Steroid DWF4/CYP90B1 medium borderline
BhybBhS70620750.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS70634490.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS70634510.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS70640670.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS70643550.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS80655930.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS80658130.1 Steroid DWF4/CYP90B1 medium borderline
BhybBhS80659020.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS80659060.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS90673950.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS90676170.1 Steroid DWF4/CYP90B1 medium borderline
BhybBhS90679200.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS90683810.1 Steroid DWF4/CYP90B1 medium borderline
BhybBhS90683810.2 Steroid DWF4/CYP90B1 medium borderline
BhybBhS90693380.1 Steroid DWF4/CYP90B1 medium borderline
BhybBhS90693390.1 Steroid DWF4/CYP90B1 low borderline
BhybBhS90693470.1 Steroid DWF4/CYP90B1 low borderline