PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3404
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
BhybBhD30213520.1 Flavonoid F3H medium borderline
BhybBhD30218360.1 Flavonoid F3H low borderline
BhybBhD30233600.1 Flavonoid F3H low borderline
BhybBhD30233600.2 Flavonoid F3H low borderline
BhybBhD30235970.1 Flavonoid F3H medium borderline
BhybBhD30239970.1 Flavonoid F3H low borderline
BhybBhD30243790.1 Flavonoid F3H medium borderline
BhybBhD30243800.1 Flavonoid F3H medium borderline
BhybBhD30243810.1 Flavonoid F3H medium borderline
BhybBhD30248340.1 Flavonoid F3H low borderline
BhybBhD30248350.1 Flavonoid F3H low borderline
BhybBhD30250040.1 Flavonoid F3H medium borderline
BhybBhD30259440.1 Flavonoid F3H medium borderline
BhybBhD30270490.1 Flavonoid F3H medium borderline
BhybBhD30270850.1 Flavonoid F3H medium borderline
BhybBhD40308400.1 Flavonoid F3H medium borderline
BhybBhD40308460.1 Flavonoid F3H medium borderline
BhybBhD40308510.1 Flavonoid F3H medium borderline
BhybBhD40321060.1 Flavonoid F3H medium borderline
BhybBhD40330840.1 Flavonoid F3H medium borderline
BhybBhD40337770.1 Flavonoid F3H medium borderline
BhybBhD40339300.1 Flavonoid F3H medium borderline
BhybBhD50340680.1 Flavonoid F3H medium pass
BhybBhD50340730.1 Flavonoid F3H medium borderline
BhybBhD50346350.1 Flavonoid F3H medium borderline
BhybBhD50349240.1 Flavonoid F3H medium borderline
BhybBhD50357370.1 Flavonoid F3H low borderline
BhybBhD50361410.1 Flavonoid F3H medium borderline
BhybBhD50365680.1 Flavonoid F3H medium borderline
BhybBhD50365690.1 Flavonoid F3H medium borderline
BhybBhD50371690.1 Flavonoid F3H medium borderline
BhybBhD50373400.1 Flavonoid F3H medium borderline
BhybBhD50373910.1 Flavonoid F3H medium borderline
BhybBhS100423700.1 Flavonoid F3H low borderline
BhybBhS100442000.1 Flavonoid F3H low borderline
BhybBhS10380380.1 Flavonoid F3H medium borderline
BhybBhS10384220.1 Flavonoid F3H medium borderline
BhybBhS10387640.1 Flavonoid F3H medium borderline
BhybBhS10387640.2 Flavonoid F3H medium borderline
BhybBhS10392220.1 Flavonoid F3H medium borderline
BhybBhS10393060.1 Flavonoid F3H low borderline
BhybBhS10402590.1 Flavonoid F3H low borderline
BhybBhS10405280.1 Flavonoid F3H medium pass
BhybBhS10412980.1 Flavonoid F3H medium borderline
BhybBhS10414260.1 Flavonoid F3H low borderline
BhybBhS10415200.1 Flavonoid F3H medium borderline
BhybBhS10421990.1 Flavonoid F3H medium borderline
BhybBhS20444530.1 Flavonoid F3H medium borderline
BhybBhS20446460.1 Flavonoid F3H medium borderline
BhybBhS20451470.1 Flavonoid F3H medium borderline