PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3'H/CYP75B
Reset
Protein/Isoform Record Pathway Family Confidence Status
BhybBhS50573660.1 Flavonoid F3'H/CYP75B medium borderline
BhybBhS50579580.1 Flavonoid F3'H/CYP75B low borderline
BhybBhS50582920.1 Flavonoid F3'H/CYP75B medium borderline
BhybBhS50583560.1 Flavonoid F3'H/CYP75B medium borderline
BhybBhS50585960.1 Flavonoid F3'H/CYP75B medium pass
BhybBhS50585990.1 Flavonoid F3'H/CYP75B low borderline
BhybBhS50587250.1 Flavonoid F3'H/CYP75B low borderline
BhybBhS50587260.1 Flavonoid F3'H/CYP75B low borderline
BhybBhS50589430.1 Flavonoid F3'H/CYP75B low borderline
BhybBhS50589430.2 Flavonoid F3'H/CYP75B low borderline
BhybBhS50589440.1 Flavonoid F3'H/CYP75B low borderline
BhybBhS60591830.1 Flavonoid F3'H/CYP75B low borderline
BhybBhS60597420.1 Flavonoid F3'H/CYP75B medium borderline
BhybBhS70634510.1 Flavonoid F3'H/CYP75B medium borderline
BhybBhS70635600.1 Flavonoid F3'H/CYP75B low borderline
BhybBhS70635620.1 Flavonoid F3'H/CYP75B medium borderline
BhybBhS80658130.1 Flavonoid F3'H/CYP75B low borderline
BhybBhS80660640.1 Flavonoid F3'H/CYP75B medium borderline
BhybBhS90672950.1 Flavonoid F3'H/CYP75B medium borderline
BhybBhS90672970.1 Flavonoid F3'H/CYP75B medium borderline
BhybBhS90675410.1 Flavonoid F3'H/CYP75B medium borderline
BhybBhS90676920.1 Flavonoid F3'H/CYP75B medium borderline
BhybBhS90681200.1 Flavonoid F3'H/CYP75B medium borderline
BhybBhS90693380.1 Flavonoid F3'H/CYP75B medium borderline
BhybBhS90693400.1 Flavonoid F3'H/CYP75B medium borderline
BhybBhS90693410.1 Flavonoid F3'H/CYP75B medium borderline
BhybBhS90693430.1 Flavonoid F3'H/CYP75B medium borderline
BhybBhS90693440.1 Flavonoid F3'H/CYP75B medium borderline
BhybBhS90693460.1 Flavonoid F3'H/CYP75B medium borderline
BhybBhS90693480.1 Flavonoid F3'H/CYP75B medium borderline
BhybBhS90693500.1 Flavonoid F3'H/CYP75B medium borderline
BhybBhS90695860.1 Flavonoid F3'H/CYP75B low borderline