PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3404
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
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Gene Pathway Family Confidence Status
BhybBhD10042910.1 Phenylpropanoid HCT medium pass
BhybBhD10042910.2 Phenylpropanoid HCT medium pass
BhybBhD10046850.1 Phenylpropanoid HCT medium pass
BhybBhD10049560.1 Phenylpropanoid HCT low borderline
BhybBhD10062830.1 Phenylpropanoid HCT medium pass
BhybBhD10062840.1 Phenylpropanoid HCT medium pass
BhybBhD10062890.1 Phenylpropanoid HCT medium pass
BhybBhD10066240.1 Phenylpropanoid HCT low borderline
BhybBhD20114490.1 Phenylpropanoid HCT low borderline
BhybBhD20151230.1 Phenylpropanoid HCT low borderline
BhybBhD20151230.2 Phenylpropanoid HCT low borderline
BhybBhD20155330.1 Phenylpropanoid HCT medium pass
BhybBhD20155890.1 Phenylpropanoid HCT low borderline
BhybBhD20162420.1 Phenylpropanoid HCT medium pass
BhybBhD20165250.1 Phenylpropanoid HCT low borderline
BhybBhD20165260.1 Phenylpropanoid HCT low borderline
BhybBhD20188430.1 Phenylpropanoid HCT medium pass
BhybBhD20188440.1 Phenylpropanoid HCT medium pass
BhybBhD20188450.1 Phenylpropanoid HCT medium pass
BhybBhD20188460.1 Phenylpropanoid HCT medium pass
BhybBhD30224190.2 Phenylpropanoid HCT medium pass
BhybBhD30224580.1 Phenylpropanoid HCT low borderline
BhybBhD30232050.1 Phenylpropanoid HCT medium pass
BhybBhD30241310.1 Phenylpropanoid HCT medium pass
BhybBhD30255230.1 Phenylpropanoid HCT medium pass
BhybBhD30258170.1 Phenylpropanoid HCT medium pass
BhybBhD40310080.1 Phenylpropanoid HCT medium pass
BhybBhD40319220.1 Phenylpropanoid HCT medium pass
BhybBhD40327970.1 Phenylpropanoid HCT medium pass
BhybBhD40329580.1 Phenylpropanoid HCT low borderline
BhybBhD50341480.1 Phenylpropanoid HCT medium pass
BhybBhD50359390.1 Phenylpropanoid HCT medium pass
BhybBhD50368270.1 Phenylpropanoid HCT low borderline
BhybBhD50373570.1 Phenylpropanoid HCT medium pass
BhybBhS10379360.1 Phenylpropanoid HCT medium pass
BhybBhS10379380.1 Phenylpropanoid HCT medium pass
BhybBhS10379400.1 Phenylpropanoid HCT medium pass
BhybBhS10379410.1 Phenylpropanoid HCT low borderline
BhybBhS10400400.1 Phenylpropanoid HCT low borderline
BhybBhS10400410.1 Phenylpropanoid HCT low borderline
BhybBhS10414480.1 Phenylpropanoid HCT low borderline
BhybBhS30488070.1 Phenylpropanoid HCT medium pass
BhybBhS30499140.1 Phenylpropanoid HCT low borderline
BhybBhS30505260.1 Phenylpropanoid HCT medium pass
BhybBhS30512920.1 Phenylpropanoid HCT medium pass
BhybBhS40535730.1 Phenylpropanoid HCT medium pass
BhybBhS40538420.1 Phenylpropanoid HCT medium pass
BhybBhS40555430.1 Phenylpropanoid HCT medium pass
BhybBhS40557510.1 Phenylpropanoid HCT low borderline
BhybBhS40557510.2 Phenylpropanoid HCT low borderline