PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
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Protein/Isoform Record Pathway Family Confidence Status Best Target
BhybBhS90679820.1 Phenylpropanoid POD low borderline POD__00007__sp_P0C5C9_REHYA_ORYSJ
BhybBhS90680300.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
BhybBhS90680910.1 Phenylpropanoid POD medium pass POD__00015__sp_Q69SV0_APX8_ORYSJ
BhybBhS90680910.2 Phenylpropanoid POD medium pass POD__00015__sp_Q69SV0_APX8_ORYSJ
BhybBhS90680910.3 Phenylpropanoid POD medium pass POD__00015__sp_Q69SV0_APX8_ORYSJ
BhybBhS90683470.1 Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL
BhybBhS90685770.1 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
BhybBhS90689530.1 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
BhybBhS90690190.1 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
BhybBhS90691670.1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
BhybBhS90693890.1 Phenylpropanoid POD low borderline POD__00028__sp_Q9ZVD5_AGO4_ARATH
BhybBhS90693900.1 Phenylpropanoid POD low borderline POD__00028__sp_Q9ZVD5_AGO4_ARATH
BhybBhS90695060.1 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
BhybBhS90696950.1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
BhybBhS90697420.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
BhybBhS90699700.1 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
BhybBhS90700020.1 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
BhybBhS90700040.1 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
BhybBhS90700050.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
BhybBhS90700060.1 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
BhybBhS90700100.1 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
BhybBhS90700110.1 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
BhybBhS90700120.1 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
BhybBhS90700130.1 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
BhybBhS90700570.1 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA