PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3404
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
BhybBhD20177370.1 Alkaloid T3O low borderline
BhybBhD20177380.1 Alkaloid T3O medium pass
BhybBhD20177390.1 Alkaloid T3O medium pass
BhybBhD20180800.1 Alkaloid T3O low borderline
BhybBhD20181070.1 Alkaloid T3O low borderline
BhybBhD20188480.1 Alkaloid T3O low borderline
BhybBhD30196000.1 Alkaloid T3O high pass
BhybBhD30197260.1 Alkaloid T3O medium borderline
BhybBhD30199390.1 Alkaloid T3O medium borderline
BhybBhD30199510.1 Alkaloid T3O medium borderline
BhybBhD30199530.1 Alkaloid T3O medium borderline
BhybBhD30199540.1 Alkaloid T3O medium borderline
BhybBhD30199550.1 Alkaloid T3O medium borderline
BhybBhD30201420.1 Alkaloid T3O medium borderline
BhybBhD30202340.1 Alkaloid T3O low borderline
BhybBhD30211820.1 Alkaloid T3O medium borderline
BhybBhD30211900.1 Alkaloid T3O medium borderline
BhybBhD30216840.1 Alkaloid T3O low borderline
BhybBhD30216870.1 Alkaloid T3O low borderline
BhybBhD30216900.1 Alkaloid T3O low borderline
BhybBhD30218900.1 Alkaloid T3O low borderline
BhybBhD30218940.1 Alkaloid T3O low borderline
BhybBhD30218970.1 Alkaloid T3O low borderline
BhybBhD30220240.1 Alkaloid T3O medium borderline
BhybBhD30223510.1 Alkaloid T3O medium borderline
BhybBhD30224460.1 Alkaloid T3O medium borderline
BhybBhD30227760.1 Alkaloid T3O medium borderline
BhybBhD30230740.1 Alkaloid T3O low borderline
BhybBhD30233780.1 Alkaloid T3O medium pass
BhybBhD30233780.2 Alkaloid T3O medium pass
BhybBhD30238750.1 Alkaloid T3O medium borderline
BhybBhD30238760.1 Alkaloid T3O medium borderline
BhybBhD30239880.1 Alkaloid T3O medium pass
BhybBhD30241040.1 Alkaloid T3O medium borderline
BhybBhD30242830.1 Alkaloid T3O medium borderline
BhybBhD30247800.1 Alkaloid T3O low borderline
BhybBhD30249090.1 Alkaloid T3O medium borderline
BhybBhD30249100.1 Alkaloid T3O medium borderline
BhybBhD30251050.1 Alkaloid T3O medium borderline
BhybBhD30251070.1 Alkaloid T3O medium borderline
BhybBhD30257100.1 Alkaloid T3O medium pass
BhybBhD30262090.1 Alkaloid T3O low borderline
BhybBhD30262320.1 Alkaloid T3O low borderline
BhybBhD30263810.1 Alkaloid T3O medium pass
BhybBhD30267580.1 Alkaloid T3O medium pass
BhybBhD30268210.1 Alkaloid T3O medium pass
BhybBhD40279310.1 Alkaloid T3O medium borderline
BhybBhD40279420.1 Alkaloid T3O medium borderline
BhybBhD40281500.1 Alkaloid T3O medium pass
BhybBhD40281510.1 Alkaloid T3O medium borderline