PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
BhybBhS50562540.3 Alkaloid T3O medium pass
BhybBhS50567680.1 Alkaloid T3O medium borderline
BhybBhS50573250.1 Alkaloid T3O medium borderline
BhybBhS50573260.1 Alkaloid T3O medium borderline
BhybBhS50573650.1 Alkaloid T3O medium borderline
BhybBhS50573660.1 Alkaloid T3O medium borderline
BhybBhS50581770.1 Alkaloid T3O medium borderline
BhybBhS50582920.1 Alkaloid T3O medium borderline
BhybBhS50587250.1 Alkaloid T3O medium pass
BhybBhS50588240.1 Alkaloid T3O medium pass
BhybBhS50588420.1 Alkaloid T3O low borderline
BhybBhS50589440.1 Alkaloid T3O medium pass
BhybBhS60591830.1 Alkaloid T3O medium pass
BhybBhS60597420.1 Alkaloid T3O medium borderline
BhybBhS60600570.1 Alkaloid T3O medium borderline
BhybBhS60602330.1 Alkaloid T3O medium pass
BhybBhS60611810.1 Alkaloid T3O medium pass
BhybBhS60617430.1 Alkaloid T3O medium pass
BhybBhS60617440.1 Alkaloid T3O medium pass
BhybBhS70618560.1 Alkaloid T3O medium pass
BhybBhS70634160.1 Alkaloid T3O medium pass
BhybBhS70636590.1 Alkaloid T3O medium borderline
BhybBhS80653060.1 Alkaloid T3O medium borderline
BhybBhS80653530.1 Alkaloid T3O medium borderline
BhybBhS80653530.2 Alkaloid T3O medium borderline
BhybBhS80653690.1 Alkaloid T3O medium pass
BhybBhS80655930.1 Alkaloid T3O low borderline
BhybBhS80657560.1 Alkaloid T3O medium pass
BhybBhS80657590.1 Alkaloid T3O medium pass
BhybBhS80659020.1 Alkaloid T3O medium borderline
BhybBhS80659060.1 Alkaloid T3O medium borderline
BhybBhS80660640.1 Alkaloid T3O medium borderline
BhybBhS80664150.1 Alkaloid T3O medium pass
BhybBhS90672430.1 Alkaloid T3O medium pass
BhybBhS90673950.1 Alkaloid T3O medium borderline
BhybBhS90674670.1 Alkaloid T3O medium borderline
BhybBhS90675410.1 Alkaloid T3O medium borderline
BhybBhS90675510.1 Alkaloid T3O medium pass
BhybBhS90676920.1 Alkaloid T3O medium borderline
BhybBhS90681200.1 Alkaloid T3O medium borderline
BhybBhS90690430.1 Alkaloid T3O medium pass
BhybBhS90690440.1 Alkaloid T3O medium pass
BhybBhS90690640.1 Alkaloid T3O medium pass
BhybBhS90693380.1 Alkaloid T3O medium borderline
BhybBhS90693390.1 Alkaloid T3O medium borderline
BhybBhS90693400.1 Alkaloid T3O medium borderline
BhybBhS90693430.1 Alkaloid T3O medium borderline
BhybBhS90693440.1 Alkaloid T3O medium borderline
BhybBhS90693460.1 Alkaloid T3O medium borderline
BhybBhS90693470.1 Alkaloid T3O medium borderline