PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3404
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
BhybBhD10001800.1 Rosmarinic Acid 4CL low borderline
BhybBhD10001800.2 Rosmarinic Acid 4CL low borderline
BhybBhD10041410.1 Rosmarinic Acid 4CL medium pass
BhybBhD10045940.1 Rosmarinic Acid 4CL low borderline
BhybBhD10065320.1 Rosmarinic Acid 4CL low borderline
BhybBhD10088810.1 Rosmarinic Acid 4CL medium pass
BhybBhD10088810.2 Rosmarinic Acid 4CL medium pass
BhybBhD10088820.1 Rosmarinic Acid 4CL medium pass
BhybBhD10102060.1 Rosmarinic Acid 4CL medium pass
BhybBhD10103740.1 Rosmarinic Acid 4CL medium pass
BhybBhD10103750.1 Rosmarinic Acid 4CL medium pass
BhybBhD10103760.1 Rosmarinic Acid 4CL medium pass
BhybBhD10103770.1 Rosmarinic Acid 4CL medium pass
BhybBhD10103870.1 Rosmarinic Acid 4CL medium pass
BhybBhD10104130.1 Rosmarinic Acid 4CL medium pass
BhybBhD20158230.1 Rosmarinic Acid 4CL low borderline
BhybBhD20158230.2 Rosmarinic Acid 4CL low borderline
BhybBhD20167350.1 Rosmarinic Acid 4CL medium pass
BhybBhD20167790.1 Rosmarinic Acid 4CL low borderline
BhybBhD20174620.1 Rosmarinic Acid 4CL low borderline
BhybBhD20184240.1 Rosmarinic Acid 4CL medium pass
BhybBhD30193090.1 Rosmarinic Acid 4CL medium pass
BhybBhD30195710.1 Rosmarinic Acid 4CL low borderline
BhybBhD30198710.1 Rosmarinic Acid 4CL medium pass
BhybBhD30210850.1 Rosmarinic Acid 4CL low borderline
BhybBhD30213670.1 Rosmarinic Acid 4CL low borderline
BhybBhD30218440.1 Rosmarinic Acid 4CL medium pass
BhybBhD30237980.1 Rosmarinic Acid 4CL medium pass
BhybBhD30237980.2 Rosmarinic Acid 4CL medium pass
BhybBhD30241980.1 Rosmarinic Acid 4CL medium pass
BhybBhD30252860.1 Rosmarinic Acid 4CL low borderline
BhybBhD30263410.1 Rosmarinic Acid 4CL medium pass
BhybBhD40287170.1 Rosmarinic Acid 4CL low borderline
BhybBhD40295780.1 Rosmarinic Acid 4CL low borderline
BhybBhD40298510.1 Rosmarinic Acid 4CL low borderline
BhybBhD40302990.1 Rosmarinic Acid 4CL medium pass
BhybBhD40303020.1 Rosmarinic Acid 4CL medium pass
BhybBhD40303020.2 Rosmarinic Acid 4CL medium pass
BhybBhD40309800.1 Rosmarinic Acid 4CL low borderline
BhybBhD40309800.2 Rosmarinic Acid 4CL low borderline
BhybBhD40309800.3 Rosmarinic Acid 4CL low borderline
BhybBhD40313150.1 Rosmarinic Acid 4CL low borderline
BhybBhD40317660.1 Rosmarinic Acid 4CL low borderline
BhybBhD40329200.1 Rosmarinic Acid 4CL medium pass
BhybBhD40334560.1 Rosmarinic Acid 4CL low borderline
BhybBhD40336600.1 Rosmarinic Acid 4CL low borderline
BhybBhD40338680.1 Rosmarinic Acid 4CL low borderline
BhybBhD50346740.1 Rosmarinic Acid 4CL medium pass
BhybBhD50351040.1 Rosmarinic Acid 4CL low borderline
BhybBhD50374650.1 Rosmarinic Acid 4CL medium pass