PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BhybBhD30238820.1 Alkaloid BBE medium borderline
BhybBhD30239040.1 Alkaloid BBE medium borderline
BhybBhD40280800.1 Alkaloid BBE low borderline
BhybBhD40301990.1 Alkaloid BBE medium borderline
BhybBhD50343980.1 Alkaloid BBE medium borderline
BhybBhD50344080.1 Alkaloid BBE medium borderline
BhybBhD50344100.1 Alkaloid BBE medium borderline
BhybBhD50363180.1 Alkaloid BBE medium borderline
BhybBhS30488810.1 Alkaloid BBE medium borderline
BhybBhS30488820.1 Alkaloid BBE medium borderline
BhybBhS30510710.1 Alkaloid BBE medium borderline
BhybBhS30510960.1 Alkaloid BBE medium borderline
BhybBhS40546210.1 Alkaloid BBE medium borderline
BhybBhS50565400.1 Alkaloid BBE medium borderline
BhybBhS60613670.1 Alkaloid BBE low borderline
BhybBhS70633330.1 Alkaloid BBE medium borderline
BhybBhS70633340.1 Alkaloid BBE medium borderline
BhybBhS70633350.1 Alkaloid BBE medium borderline
BhybBhS90675030.1 Alkaloid BBE medium borderline
BhybBhS90675100.1 Alkaloid BBE medium borderline
BhybBhS90675110.1 Alkaloid BBE medium borderline
BhybBhS90688740.1 Alkaloid BBE medium borderline
BhybBhD10003550.1 Alkaloid CNMT low borderline
BhybBhD10003550.2 Alkaloid CNMT low borderline
BhybBhD10050680.1 Alkaloid CNMT medium borderline
BhybBhD10064920.1 Alkaloid CNMT low borderline
BhybBhD10066050.1 Alkaloid CNMT low borderline
BhybBhD20108900.1 Alkaloid CNMT low borderline
BhybBhD20160810.1 Alkaloid CNMT low borderline
BhybBhD40276660.1 Alkaloid CNMT low borderline
BhybBhS100423650.1 Alkaloid CNMT low borderline
BhybBhS100436320.1 Alkaloid CNMT low borderline
BhybBhS10402690.1 Alkaloid CNMT low borderline
BhybBhS10419200.1 Alkaloid CNMT low borderline
BhybBhS20483620.1 Alkaloid CNMT low borderline
BhybBhS40552070.1 Alkaloid CNMT low borderline
BhybBhS70621560.1 Alkaloid CNMT low borderline
BhybBhS70621560.2 Alkaloid CNMT low borderline
BhybBhS70621560.4 Alkaloid CNMT low borderline
BhybBhS70621560.6 Alkaloid CNMT low borderline
BhybBhS70622440.1 Alkaloid CNMT low borderline
BhybBhS70634700.1 Alkaloid CNMT medium borderline
BhybBhD10000540.1 Alkaloid CODM/T6ODM medium borderline
BhybBhD10019170.1 Alkaloid CODM/T6ODM medium borderline
BhybBhD10019170.2 Alkaloid CODM/T6ODM medium borderline
BhybBhD10049550.1 Alkaloid CODM/T6ODM medium borderline
BhybBhD10050720.1 Alkaloid CODM/T6ODM medium borderline
BhybBhD10058340.1 Alkaloid CODM/T6ODM medium borderline
BhybBhD10061730.1 Alkaloid CODM/T6ODM medium borderline
BhybBhD10063880.1 Alkaloid CODM/T6ODM medium borderline