PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BhybBhS10399300.1 Alkaloid 7DLH medium borderline
BhybBhS20461040.1 Alkaloid 7DLH low borderline
BhybBhS50565810.1 Alkaloid 7DLH low borderline
BhybBhS50579580.1 Alkaloid 7DLH medium borderline
BhybBhS50579590.1 Alkaloid 7DLH medium borderline
BhybBhS50589430.1 Alkaloid 7DLH medium borderline
BhybBhS50589430.2 Alkaloid 7DLH medium borderline
BhybBhS60594160.1 Alkaloid 7DLH low borderline
BhybBhS80664930.1 Alkaloid 7DLH medium borderline
BhybBhD10027560.1 Alkaloid 8HGO medium borderline
BhybBhD10027570.1 Alkaloid 8HGO medium borderline
BhybBhD10098680.1 Alkaloid 8HGO medium borderline
BhybBhD10098690.1 Alkaloid 8HGO medium borderline
BhybBhD20108040.1 Alkaloid 8HGO low borderline
BhybBhD30221160.1 Alkaloid 8HGO medium borderline
BhybBhD30232650.1 Alkaloid 8HGO low borderline
BhybBhD30259850.1 Alkaloid 8HGO medium borderline
BhybBhD30259850.2 Alkaloid 8HGO medium borderline
BhybBhD30267210.1 Alkaloid 8HGO medium borderline
BhybBhD40307070.1 Alkaloid 8HGO medium borderline
BhybBhD40307090.1 Alkaloid 8HGO medium borderline
BhybBhD40307100.1 Alkaloid 8HGO medium borderline
BhybBhS100432260.1 Alkaloid 8HGO low borderline
BhybBhS10419910.1 Alkaloid 8HGO low borderline
BhybBhS20452010.1 Alkaloid 8HGO medium borderline
BhybBhS20452020.1 Alkaloid 8HGO medium borderline
BhybBhS20452020.2 Alkaloid 8HGO medium borderline
BhybBhS30496210.1 Alkaloid 8HGO medium borderline
BhybBhS30505750.1 Alkaloid 8HGO low borderline
BhybBhS40527420.1 Alkaloid 8HGO medium borderline
BhybBhS40534160.1 Alkaloid 8HGO medium borderline
BhybBhS50562830.1 Alkaloid 8HGO medium borderline
BhybBhS50562840.1 Alkaloid 8HGO medium borderline
BhybBhS50562860.1 Alkaloid 8HGO medium borderline
BhybBhS60596180.1 Alkaloid 8HGO medium borderline
BhybBhS60596180.2 Alkaloid 8HGO medium borderline
BhybBhS60596180.3 Alkaloid 8HGO medium borderline
BhybBhD10067270.1 Alkaloid ADC medium pass
BhybBhD30206930.1 Alkaloid ADC low borderline
BhybBhS40543530.1 Alkaloid ADC low borderline
BhybBhS70620540.1 Alkaloid ADC medium pass
BhybBhD10052110.1 Alkaloid BBE medium borderline
BhybBhD10052120.1 Alkaloid BBE medium borderline
BhybBhD10052130.1 Alkaloid BBE medium borderline
BhybBhD10077210.2 Alkaloid BBE low borderline
BhybBhD30202460.1 Alkaloid BBE low borderline
BhybBhD30202480.1 Alkaloid BBE low borderline
BhybBhD30204080.1 Alkaloid BBE medium borderline
BhybBhD30213990.1 Alkaloid BBE medium borderline
BhybBhD30214000.1 Alkaloid BBE low borderline