PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BhybBhD10106870.1 Flavonoid F3H medium borderline
BhybBhD20113660.1 Flavonoid F3H medium borderline
BhybBhD20114630.1 Flavonoid F3H low borderline
BhybBhD20114630.2 Flavonoid F3H low borderline
BhybBhD20116000.1 Flavonoid F3H medium borderline
BhybBhD20124610.1 Flavonoid F3H medium pass
BhybBhD20124610.2 Flavonoid F3H medium pass
BhybBhD20130100.1 Flavonoid F3H low borderline
BhybBhD20130140.1 Flavonoid F3H medium borderline
BhybBhD20141560.1 Flavonoid F3H medium borderline
BhybBhD20149610.1 Flavonoid F3H medium borderline
BhybBhD20152480.1 Flavonoid F3H low borderline
BhybBhD20154100.1 Flavonoid F3H medium borderline
BhybBhD20154110.1 Flavonoid F3H medium borderline
BhybBhD20154810.1 Flavonoid F3H low borderline
BhybBhD20157840.1 Flavonoid F3H medium borderline
BhybBhD20160880.1 Flavonoid F3H low borderline
BhybBhD20162810.1 Flavonoid F3H medium borderline
BhybBhD20174270.1 Flavonoid F3H medium borderline
BhybBhD20179230.1 Flavonoid F3H medium borderline
BhybBhD20179230.2 Flavonoid F3H medium borderline
BhybBhD20183050.1 Flavonoid F3H medium borderline
BhybBhD20187230.1 Flavonoid F3H medium borderline
BhybBhD30196520.1 Flavonoid F3H medium borderline
BhybBhD30213520.1 Flavonoid F3H medium borderline
BhybBhD30218360.1 Flavonoid F3H low borderline
BhybBhD30233600.1 Flavonoid F3H low borderline
BhybBhD30233600.2 Flavonoid F3H low borderline
BhybBhD30235970.1 Flavonoid F3H medium borderline
BhybBhD30239970.1 Flavonoid F3H low borderline
BhybBhD30243790.1 Flavonoid F3H medium borderline
BhybBhD30243800.1 Flavonoid F3H medium borderline
BhybBhD30243810.1 Flavonoid F3H medium borderline
BhybBhD30248340.1 Flavonoid F3H low borderline
BhybBhD30248350.1 Flavonoid F3H low borderline
BhybBhD30250040.1 Flavonoid F3H medium borderline
BhybBhD30259440.1 Flavonoid F3H medium borderline
BhybBhD30270490.1 Flavonoid F3H medium borderline
BhybBhD30270850.1 Flavonoid F3H medium borderline
BhybBhD40308400.1 Flavonoid F3H medium borderline
BhybBhD40308460.1 Flavonoid F3H medium borderline
BhybBhD40308510.1 Flavonoid F3H medium borderline
BhybBhD40321060.1 Flavonoid F3H medium borderline
BhybBhD40330840.1 Flavonoid F3H medium borderline
BhybBhD40337770.1 Flavonoid F3H medium borderline
BhybBhD40339300.1 Flavonoid F3H medium borderline
BhybBhD50340680.1 Flavonoid F3H medium pass
BhybBhD50340730.1 Flavonoid F3H medium borderline
BhybBhD50346350.1 Flavonoid F3H medium borderline
BhybBhD50349240.1 Flavonoid F3H medium borderline