PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BhybBhD30200160.3 Alkaloid G8O/G8H medium borderline
BhybBhD30200160.4 Alkaloid G8O/G8H medium borderline
BhybBhD30205590.1 Alkaloid G8O/G8H medium borderline
BhybBhD30206580.1 Alkaloid G8O/G8H medium borderline
BhybBhD30211680.1 Alkaloid G8O/G8H medium borderline
BhybBhD30214960.1 Alkaloid G8O/G8H medium borderline
BhybBhD30232530.1 Alkaloid G8O/G8H medium borderline
BhybBhD30240060.1 Alkaloid G8O/G8H medium borderline
BhybBhD30240080.1 Alkaloid G8O/G8H medium borderline
BhybBhD40279410.1 Alkaloid G8O/G8H medium borderline
BhybBhD40281570.1 Alkaloid G8O/G8H medium borderline
BhybBhD40285100.1 Alkaloid G8O/G8H medium borderline
BhybBhD40287430.1 Alkaloid G8O/G8H medium borderline
BhybBhD40314280.1 Alkaloid G8O/G8H medium borderline
BhybBhD40323720.1 Alkaloid G8O/G8H low borderline
BhybBhD40332050.1 Alkaloid G8O/G8H medium borderline
BhybBhD40332060.1 Alkaloid G8O/G8H medium borderline
BhybBhD40334690.1 Alkaloid G8O/G8H medium borderline
BhybBhD50340860.1 Alkaloid G8O/G8H medium borderline
BhybBhD50365020.1 Alkaloid G8O/G8H medium borderline
BhybBhD50371210.1 Alkaloid G8O/G8H medium borderline
BhybBhS100425710.1 Alkaloid G8O/G8H medium borderline
BhybBhS100425810.1 Alkaloid G8O/G8H medium borderline
BhybBhS100441810.1 Alkaloid G8O/G8H low borderline
BhybBhS10401240.1 Alkaloid G8O/G8H medium borderline
BhybBhS10411770.1 Alkaloid G8O/G8H low borderline
BhybBhS10411780.1 Alkaloid G8O/G8H medium pass
BhybBhS10421910.1 Alkaloid G8O/G8H medium borderline
BhybBhS20447550.1 Alkaloid G8O/G8H medium borderline
BhybBhS20468170.1 Alkaloid G8O/G8H medium borderline
BhybBhS20468600.1 Alkaloid G8O/G8H medium borderline
BhybBhS20478090.1 Alkaloid G8O/G8H medium borderline
BhybBhS30488130.1 Alkaloid G8O/G8H medium borderline
BhybBhS30505640.1 Alkaloid G8O/G8H medium borderline
BhybBhS30511900.1 Alkaloid G8O/G8H medium borderline
BhybBhS30511910.1 Alkaloid G8O/G8H medium borderline
BhybBhS30514060.1 Alkaloid G8O/G8H low borderline
BhybBhS30518360.1 Alkaloid G8O/G8H medium borderline
BhybBhS40543830.1 Alkaloid G8O/G8H medium borderline
BhybBhS40544870.1 Alkaloid G8O/G8H medium borderline
BhybBhS40548610.1 Alkaloid G8O/G8H medium borderline
BhybBhS40549720.1 Alkaloid G8O/G8H medium borderline
BhybBhS50583580.1 Alkaloid G8O/G8H medium borderline
BhybBhS50585990.1 Alkaloid G8O/G8H medium borderline
BhybBhS60606350.1 Alkaloid G8O/G8H medium pass
BhybBhS70634470.1 Alkaloid G8O/G8H medium borderline
BhybBhS70634490.1 Alkaloid G8O/G8H medium borderline
BhybBhS70634510.1 Alkaloid G8O/G8H medium borderline
BhybBhS90678500.1 Alkaloid G8O/G8H medium borderline
BhybBhS90690320.1 Alkaloid G8O/G8H medium borderline