PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BhybBhD40281560.1 Phenylpropanoid CAD low borderline
BhybBhD40307070.1 Phenylpropanoid CAD low borderline
BhybBhD40307090.1 Phenylpropanoid CAD low borderline
BhybBhD40307100.1 Phenylpropanoid CAD low borderline
BhybBhD40318150.1 Phenylpropanoid CAD medium pass
BhybBhD40318160.1 Phenylpropanoid CAD medium pass
BhybBhD50340890.1 Phenylpropanoid CAD low borderline
BhybBhD50342370.1 Phenylpropanoid CAD low borderline
BhybBhD50346310.1 Phenylpropanoid CAD medium pass
BhybBhD50365990.1 Phenylpropanoid CAD low borderline
BhybBhD50368600.1 Phenylpropanoid CAD low borderline
BhybBhD50368610.1 Phenylpropanoid CAD low borderline
BhybBhD50368660.1 Phenylpropanoid CAD low borderline
BhybBhD50368660.2 Phenylpropanoid CAD low borderline
BhybBhD50368700.1 Phenylpropanoid CAD low borderline
BhybBhD50368790.1 Phenylpropanoid CAD medium pass
BhybBhD50370490.1 Phenylpropanoid CAD low borderline
BhybBhD50370510.1 Phenylpropanoid CAD medium borderline
BhybBhD50370520.1 Phenylpropanoid CAD medium borderline
BhybBhS100427990.1 Phenylpropanoid CAD low borderline
BhybBhS100428020.1 Phenylpropanoid CAD low borderline
BhybBhS10403990.1 Phenylpropanoid CAD medium borderline
BhybBhS10404020.1 Phenylpropanoid CAD medium borderline
BhybBhS10404030.1 Phenylpropanoid CAD medium borderline
BhybBhS10411010.1 Phenylpropanoid CAD low borderline
BhybBhS20451510.1 Phenylpropanoid CAD low borderline
BhybBhS20482650.1 Phenylpropanoid CAD medium borderline
BhybBhS30487250.1 Phenylpropanoid CAD medium pass
BhybBhS30489420.1 Phenylpropanoid CAD low borderline
BhybBhS30489450.1 Phenylpropanoid CAD low borderline
BhybBhS30489470.1 Phenylpropanoid CAD low borderline
BhybBhS30489940.1 Phenylpropanoid CAD low borderline
BhybBhS30490840.1 Phenylpropanoid CAD low borderline
BhybBhS30492430.1 Phenylpropanoid CAD low borderline
BhybBhS30496210.1 Phenylpropanoid CAD low borderline
BhybBhS30498840.1 Phenylpropanoid CAD medium pass
BhybBhS30510620.1 Phenylpropanoid CAD low borderline
BhybBhS30517030.1 Phenylpropanoid CAD medium borderline
BhybBhS40550110.1 Phenylpropanoid CAD medium pass
BhybBhS40552090.1 Phenylpropanoid CAD low borderline
BhybBhS50562830.1 Phenylpropanoid CAD low borderline
BhybBhS50562840.1 Phenylpropanoid CAD low borderline
BhybBhS50562860.1 Phenylpropanoid CAD low borderline
BhybBhS50571160.1 Phenylpropanoid CAD medium pass
BhybBhS50571170.1 Phenylpropanoid CAD medium pass
BhybBhS50576460.1 Phenylpropanoid CAD low borderline
BhybBhS70620370.1 Phenylpropanoid CAD low borderline
BhybBhS70640470.1 Phenylpropanoid CAD medium borderline
BhybBhS80669220.1 Phenylpropanoid CAD low borderline
BhybBhS80669990.1 Phenylpropanoid CAD low borderline