PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BhybBhS50573850.1 Terpenoid FPPS medium pass
BhybBhS50573850.2 Terpenoid FPPS medium pass
BhybBhS70622800.1 Terpenoid FPPS medium pass
BhybBhS80649160.1 Terpenoid FPPS medium pass
BhybBhS90697410.1 Terpenoid FPPS medium pass
BhybBhD10006260.1 Terpenoid GGPPS medium borderline
BhybBhD10030440.1 Terpenoid GGPPS medium borderline
BhybBhD10043300.1 Terpenoid GGPPS medium borderline
BhybBhD20118940.1 Terpenoid GGPPS medium pass
BhybBhD20128230.1 Terpenoid GGPPS medium borderline
BhybBhD30261940.1 Terpenoid GGPPS medium borderline
BhybBhD40326230.1 Terpenoid GGPPS low borderline
BhybBhD40331340.1 Terpenoid GGPPS medium borderline
BhybBhS10410410.1 Terpenoid GGPPS medium borderline
BhybBhS30490660.1 Terpenoid GGPPS medium borderline
BhybBhS30490660.2 Terpenoid GGPPS medium borderline
BhybBhS30490660.3 Terpenoid GGPPS medium borderline
BhybBhS30490660.4 Terpenoid GGPPS medium borderline
BhybBhS40532440.1 Terpenoid GGPPS medium borderline
BhybBhS50582890.1 Terpenoid GGPPS medium borderline
BhybBhS60598830.1 Terpenoid GGPPS medium borderline
BhybBhS70640910.1 Terpenoid GGPPS medium borderline
BhybBhS80646200.1 Terpenoid GGPPS medium borderline
BhybBhD10012350.1 Terpenoid HDR/IspH high pass
BhybBhS20475830.1 Terpenoid HDR/IspH high pass
BhybBhD30257570.1 Terpenoid HDS/IspG high pass
BhybBhS40536320.1 Terpenoid HDS/IspG high pass
BhybBhD30242140.1 Terpenoid HMGR low borderline
BhybBhD30246150.1 Terpenoid HMGR medium pass
BhybBhD30264530.1 Terpenoid HMGR medium pass
BhybBhD30264530.2 Terpenoid HMGR medium pass
BhybBhD40323920.1 Terpenoid HMGR medium pass
BhybBhS30513540.1 Terpenoid HMGR low borderline
BhybBhS30516930.1 Terpenoid HMGR medium pass
BhybBhS40529880.1 Terpenoid HMGR medium pass
BhybBhS50576290.1 Terpenoid HMGR medium pass
BhybBhD10105170.1 Terpenoid HMGS high pass
BhybBhD30248860.1 Terpenoid HMGS high pass
BhybBhS20446100.1 Terpenoid HMGS high pass
BhybBhS20446100.2 Terpenoid HMGS high pass
BhybBhS30519130.1 Terpenoid HMGS high pass
BhybBhD10033070.1 Terpenoid IDI medium pass
BhybBhD20142110.1 Terpenoid IDI medium pass
BhybBhD40293780.1 Terpenoid IDI low borderline
BhybBhD40299870.1 Terpenoid IDI low borderline
BhybBhS60601400.1 Terpenoid IDI medium pass
BhybBhS80657670.1 Terpenoid IDI medium pass
BhybBhD20183340.1 Terpenoid MCT/IspD high pass
BhybBhD30216560.1 Terpenoid MCT/IspD low borderline
BhybBhD50368930.1 Terpenoid MCT/IspD low borderline