PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BhybBhS10384010.1 Terpenoid MCT/IspD high pass
BhybBhS30487320.1 Terpenoid MCT/IspD low borderline
BhybBhS90693660.1 Terpenoid MCT/IspD low borderline
BhybBhD20190040.1 Terpenoid MDS/IspF low borderline
BhybBhD30262570.1 Terpenoid MDS/IspF high pass
BhybBhS10377960.1 Terpenoid MDS/IspF low borderline
BhybBhS40531800.1 Terpenoid MDS/IspF high pass
BhybBhD20189720.1 Terpenoid MVD medium pass
BhybBhD30218230.1 Terpenoid MVD low borderline
BhybBhD30218230.2 Terpenoid MVD low borderline
BhybBhD40305250.1 Terpenoid MVD low borderline
BhybBhD40335660.1 Terpenoid MVD low borderline
BhybBhS10378170.1 Terpenoid MVD medium pass
BhybBhS30493720.1 Terpenoid MVD low borderline
BhybBhS50587010.1 Terpenoid MVD low borderline
BhybBhS60595760.1 Terpenoid MVD low borderline
BhybBhD10003190.1 Terpenoid MVK low borderline
BhybBhD20125930.1 Terpenoid MVK medium pass
BhybBhD20140880.1 Terpenoid MVK low borderline
BhybBhD30274330.1 Terpenoid MVK low borderline
BhybBhS10404120.1 Terpenoid MVK medium pass
BhybBhS10404120.2 Terpenoid MVK medium pass
BhybBhS20483960.1 Terpenoid MVK low borderline
BhybBhS40521150.1 Terpenoid MVK low borderline
BhybBhD10093190.1 Terpenoid PMK medium pass
BhybBhD10093190.2 Terpenoid PMK medium pass
BhybBhD40275290.1 Terpenoid PMK low borderline
BhybBhS20456590.1 Terpenoid PMK medium pass
BhybBhS40533980.1 Terpenoid PMK low borderline
BhybBhS40555850.1 Terpenoid PMK low borderline
BhybBhD10066060.1 Terpenoid TPS medium pass
BhybBhD10081840.1 Terpenoid TPS medium pass
BhybBhD10086000.1 Terpenoid TPS medium pass
BhybBhD10086000.2 Terpenoid TPS medium pass
BhybBhD20118160.1 Terpenoid TPS medium pass
BhybBhD20151080.1 Terpenoid TPS medium pass
BhybBhD20151080.2 Terpenoid TPS medium pass
BhybBhD20151080.3 Terpenoid TPS medium pass
BhybBhD20157650.1 Terpenoid TPS low borderline
BhybBhD20187370.1 Terpenoid TPS medium pass
BhybBhD30193500.1 Terpenoid TPS medium pass
BhybBhD30193510.1 Terpenoid TPS medium pass
BhybBhD30211340.1 Terpenoid TPS medium pass
BhybBhD30213290.1 Terpenoid TPS medium pass
BhybBhD30213310.1 Terpenoid TPS medium pass
BhybBhD30213320.1 Terpenoid TPS medium pass
BhybBhD30238770.1 Terpenoid TPS medium pass
BhybBhD40281550.1 Terpenoid TPS medium pass
BhybBhD40281550.2 Terpenoid TPS medium pass
BhybBhD40281560.1 Terpenoid TPS medium pass