PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
BhybBhS30508460.1 Alkaloid NCS medium borderline
BhybBhS40523570.1 Alkaloid NCS low borderline
BhybBhS40535910.1 Alkaloid NCS medium pass
BhybBhS40538590.1 Alkaloid NCS low borderline
BhybBhS50561700.1 Alkaloid NCS medium borderline
BhybBhS50588660.1 Alkaloid NCS medium borderline
BhybBhS70636210.1 Alkaloid NCS medium borderline
BhybBhS80667420.1 Alkaloid NCS medium borderline
BhybBhS90676460.1 Alkaloid NCS medium borderline
BhybBhS90684270.1 Alkaloid NCS medium borderline
BhybBhS90691900.1 Alkaloid NCS medium pass
BhybBhS90696360.1 Alkaloid NCS medium borderline
BhybBhS90698210.1 Alkaloid NCS medium borderline
BhybBhD10016380.1 Alkaloid NMT medium pass
BhybBhD10023510.1 Alkaloid NMT medium pass
BhybBhD10025760.1 Alkaloid NMT medium borderline
BhybBhD10025760.2 Alkaloid NMT medium borderline
BhybBhD10026520.1 Alkaloid NMT medium pass
BhybBhD10026520.2 Alkaloid NMT medium pass
BhybBhD10026520.3 Alkaloid NMT medium pass
BhybBhD10026520.4 Alkaloid NMT medium pass
BhybBhD10038070.1 Alkaloid NMT medium pass
BhybBhD10038440.1 Alkaloid NMT low borderline
BhybBhD10057090.1 Alkaloid NMT low borderline
BhybBhD10061260.1 Alkaloid NMT low borderline
BhybBhD10062680.1 Alkaloid NMT low borderline
BhybBhD10064680.1 Alkaloid NMT medium pass
BhybBhD10064680.2 Alkaloid NMT medium pass
BhybBhD10064680.3 Alkaloid NMT medium pass
BhybBhD10066530.1 Alkaloid NMT low borderline
BhybBhD10068800.1 Alkaloid NMT medium pass
BhybBhD10070430.1 Alkaloid NMT low borderline
BhybBhD10070430.2 Alkaloid NMT low borderline
BhybBhD10072560.1 Alkaloid NMT medium pass
BhybBhD10073190.1 Alkaloid NMT medium borderline
BhybBhD10074720.1 Alkaloid NMT medium pass
BhybBhD10088600.1 Alkaloid NMT medium pass
BhybBhD10089110.1 Alkaloid NMT medium pass
BhybBhD10093980.1 Alkaloid NMT medium pass
BhybBhD10093980.2 Alkaloid NMT medium pass
BhybBhD10093980.3 Alkaloid NMT medium pass
BhybBhD10093980.4 Alkaloid NMT medium pass
BhybBhD10103570.1 Alkaloid NMT medium borderline
BhybBhD20109950.1 Alkaloid NMT medium borderline
BhybBhD20114310.1 Alkaloid NMT low borderline
BhybBhD20116510.1 Alkaloid NMT low borderline
BhybBhD20125990.1 Alkaloid NMT medium pass
BhybBhD20131580.1 Alkaloid NMT medium borderline
BhybBhD20131580.2 Alkaloid NMT medium borderline
BhybBhD20136850.1 Alkaloid NMT medium pass