PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BhybBhS60617430.1 Flavonoid IFS low borderline
BhybBhS60617440.1 Flavonoid IFS low borderline
BhybBhS70620750.1 Flavonoid IFS low borderline
BhybBhS70620790.1 Flavonoid IFS low borderline
BhybBhS70620800.1 Flavonoid IFS low borderline
BhybBhS70624430.1 Flavonoid IFS low borderline
BhybBhS70636590.1 Flavonoid IFS medium borderline
BhybBhS70643550.1 Flavonoid IFS medium borderline
BhybBhS80651450.1 Flavonoid IFS medium borderline
BhybBhS80653060.1 Flavonoid IFS medium borderline
BhybBhS80653530.1 Flavonoid IFS medium borderline
BhybBhS80653530.2 Flavonoid IFS medium borderline
BhybBhS80653690.1 Flavonoid IFS low borderline
BhybBhS80655930.1 Flavonoid IFS low borderline
BhybBhS80659020.1 Flavonoid IFS medium borderline
BhybBhS80659060.1 Flavonoid IFS medium borderline
BhybBhS80662940.1 Flavonoid IFS medium borderline
BhybBhS80664150.1 Flavonoid IFS low borderline
BhybBhS90673950.1 Flavonoid IFS medium borderline
BhybBhS90674180.1 Flavonoid IFS medium borderline
BhybBhS90674670.1 Flavonoid IFS medium borderline
BhybBhS90675510.1 Flavonoid IFS low borderline
BhybBhS90678500.1 Flavonoid IFS medium borderline
BhybBhS90683810.1 Flavonoid IFS low borderline
BhybBhS90683810.2 Flavonoid IFS low borderline
BhybBhS90683810.3 Flavonoid IFS low borderline
BhybBhS90684530.1 Flavonoid IFS medium borderline
BhybBhS90690320.1 Flavonoid IFS low borderline
BhybBhS90690640.1 Flavonoid IFS low borderline
BhybBhS90693290.1 Flavonoid IFS medium borderline
BhybBhD20153790.1 Flavonoid PAL low borderline
BhybBhD30256190.1 Flavonoid PAL medium pass
BhybBhD30258690.1 Flavonoid PAL high pass
BhybBhD30259230.1 Flavonoid PAL high pass
BhybBhD30259250.1 Flavonoid PAL high pass
BhybBhD30259260.1 Flavonoid PAL high pass
BhybBhD30259270.1 Flavonoid PAL high pass
BhybBhD50361130.1 Flavonoid PAL high pass
BhybBhS40534710.1 Flavonoid PAL high pass
BhybBhS40534720.1 Flavonoid PAL high pass
BhybBhS40534730.1 Flavonoid PAL high pass
BhybBhS40534740.1 Flavonoid PAL high pass
BhybBhS40535220.1 Flavonoid PAL high pass
BhybBhS40537520.1 Flavonoid PAL high pass
BhybBhS80667230.1 Flavonoid PAL low borderline
BhybBhS90687040.1 Flavonoid PAL high pass
BhybBhD10005780.1 Flavonoid UFGT high pass
BhybBhD10005790.1 Flavonoid UFGT high pass
BhybBhD10005810.1 Flavonoid UFGT medium pass
BhybBhD10010210.1 Flavonoid UFGT medium pass