PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BhybBhS10400410.1 Phenylpropanoid HCT low borderline
BhybBhS10414480.1 Phenylpropanoid HCT low borderline
BhybBhS30488070.1 Phenylpropanoid HCT medium pass
BhybBhS30499140.1 Phenylpropanoid HCT low borderline
BhybBhS30505260.1 Phenylpropanoid HCT medium pass
BhybBhS30512920.1 Phenylpropanoid HCT medium pass
BhybBhS40535730.1 Phenylpropanoid HCT medium pass
BhybBhS40538420.1 Phenylpropanoid HCT medium pass
BhybBhS40555430.1 Phenylpropanoid HCT medium pass
BhybBhS40557510.1 Phenylpropanoid HCT low borderline
BhybBhS40557510.2 Phenylpropanoid HCT low borderline
BhybBhS50560320.1 Phenylpropanoid HCT medium pass
BhybBhS50560320.2 Phenylpropanoid HCT medium pass
BhybBhS50560340.1 Phenylpropanoid HCT medium pass
BhybBhS50560700.1 Phenylpropanoid HCT low borderline
BhybBhS50564810.1 Phenylpropanoid HCT low borderline
BhybBhS50572160.1 Phenylpropanoid HCT medium pass
BhybBhS70619780.1 Phenylpropanoid HCT medium pass
BhybBhS70619820.1 Phenylpropanoid HCT medium pass
BhybBhS70619840.1 Phenylpropanoid HCT low borderline
BhybBhS70621770.1 Phenylpropanoid HCT low borderline
BhybBhS70623950.1 Phenylpropanoid HCT medium pass
BhybBhS70624010.1 Phenylpropanoid HCT medium pass
BhybBhS70624020.1 Phenylpropanoid HCT medium pass
BhybBhS70638080.1 Phenylpropanoid HCT medium pass
BhybBhS70641370.1 Phenylpropanoid HCT medium pass
BhybBhS80665120.1 Phenylpropanoid HCT low borderline
BhybBhS80668310.1 Phenylpropanoid HCT medium pass
BhybBhS80668710.1 Phenylpropanoid HCT low borderline
BhybBhS90672760.1 Phenylpropanoid HCT low borderline
BhybBhS90673540.1 Phenylpropanoid HCT medium pass
BhybBhS90685850.1 Phenylpropanoid HCT medium pass
BhybBhS90686350.1 Phenylpropanoid HCT low borderline
BhybBhS90693030.1 Phenylpropanoid HCT low borderline
BhybBhD10013380.1 Phenylpropanoid LAC medium pass
BhybBhD10032460.1 Phenylpropanoid LAC medium pass
BhybBhD10032490.1 Phenylpropanoid LAC medium pass
BhybBhD10050980.1 Phenylpropanoid LAC low borderline
BhybBhD10070360.1 Phenylpropanoid LAC low borderline
BhybBhD10080460.1 Phenylpropanoid LAC low borderline
BhybBhD10089370.1 Phenylpropanoid LAC medium pass
BhybBhD10091600.1 Phenylpropanoid LAC medium pass
BhybBhD10101370.1 Phenylpropanoid LAC medium pass
BhybBhD20139330.1 Phenylpropanoid LAC medium pass
BhybBhD20139350.1 Phenylpropanoid LAC medium pass
BhybBhD20178880.1 Phenylpropanoid LAC medium pass
BhybBhD20180000.1 Phenylpropanoid LAC medium pass
BhybBhD20180010.1 Phenylpropanoid LAC medium pass
BhybBhD20180070.1 Phenylpropanoid LAC medium pass
BhybBhD20180530.1 Phenylpropanoid LAC medium pass