PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BhybBhS40555300.1 Phenylpropanoid LAC medium pass
BhybBhS40555350.1 Phenylpropanoid LAC medium pass
BhybBhS40555370.1 Phenylpropanoid LAC medium pass
BhybBhS40555380.1 Phenylpropanoid LAC medium pass
BhybBhS40555440.1 Phenylpropanoid LAC medium pass
BhybBhS50569990.1 Phenylpropanoid LAC medium pass
BhybBhS50577280.1 Phenylpropanoid LAC medium pass
BhybBhS50583030.1 Phenylpropanoid LAC medium pass
BhybBhS50590000.1 Phenylpropanoid LAC medium pass
BhybBhS60600620.1 Phenylpropanoid LAC medium pass
BhybBhS60600660.1 Phenylpropanoid LAC medium pass
BhybBhS60616220.1 Phenylpropanoid LAC low borderline
BhybBhS70618120.1 Phenylpropanoid LAC low borderline
BhybBhS70634380.1 Phenylpropanoid LAC medium pass
BhybBhS70634400.1 Phenylpropanoid LAC low borderline
BhybBhS80655290.1 Phenylpropanoid LAC medium pass
BhybBhS80655310.1 Phenylpropanoid LAC medium pass
BhybBhD20153790.1 Phenylpropanoid PAL low borderline
BhybBhD30256190.1 Phenylpropanoid PAL medium pass
BhybBhD30258690.1 Phenylpropanoid PAL high pass
BhybBhD30259230.1 Phenylpropanoid PAL high pass
BhybBhD30259250.1 Phenylpropanoid PAL high pass
BhybBhD30259260.1 Phenylpropanoid PAL high pass
BhybBhD30259270.1 Phenylpropanoid PAL high pass
BhybBhD50361130.1 Phenylpropanoid PAL high pass
BhybBhS40534710.1 Phenylpropanoid PAL high pass
BhybBhS40534720.1 Phenylpropanoid PAL high pass
BhybBhS40534730.1 Phenylpropanoid PAL high pass
BhybBhS40534740.1 Phenylpropanoid PAL high pass
BhybBhS40535220.1 Phenylpropanoid PAL high pass
BhybBhS40537520.1 Phenylpropanoid PAL high pass
BhybBhS80667230.1 Phenylpropanoid PAL low borderline
BhybBhS90687040.1 Phenylpropanoid PAL high pass
BhybBhD10001580.1 Phenylpropanoid POD medium pass
BhybBhD10001580.2 Phenylpropanoid POD medium pass
BhybBhD10001720.1 Phenylpropanoid POD medium pass
BhybBhD10006150.1 Phenylpropanoid POD medium pass
BhybBhD10009780.1 Phenylpropanoid POD medium pass
BhybBhD10009790.1 Phenylpropanoid POD medium pass
BhybBhD10012190.1 Phenylpropanoid POD medium pass
BhybBhD10015950.1 Phenylpropanoid POD medium pass
BhybBhD10020530.1 Phenylpropanoid POD medium pass
BhybBhD10020740.1 Phenylpropanoid POD medium pass
BhybBhD10021170.1 Phenylpropanoid POD medium pass
BhybBhD10021170.2 Phenylpropanoid POD medium pass
BhybBhD10021540.1 Phenylpropanoid POD medium pass
BhybBhD10023050.1 Phenylpropanoid POD medium pass
BhybBhD10023120.1 Phenylpropanoid POD medium pass
BhybBhD10023130.1 Phenylpropanoid POD medium pass
BhybBhD10023140.1 Phenylpropanoid POD medium pass