PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BhybBhS40539320.1 Alkaloid SGD medium pass
BhybBhS40539320.2 Alkaloid SGD medium pass
BhybBhS40539330.1 Alkaloid SGD medium pass
BhybBhS40539350.1 Alkaloid SGD medium pass
BhybBhS40557140.1 Alkaloid SGD medium pass
BhybBhS50577560.1 Alkaloid SGD medium pass
BhybBhS50577580.1 Alkaloid SGD medium pass
BhybBhS50577600.1 Alkaloid SGD medium pass
BhybBhS60593670.1 Alkaloid SGD low borderline
BhybBhS60593670.2 Alkaloid SGD low borderline
BhybBhS70629900.1 Alkaloid SGD medium pass
BhybBhS70640390.1 Alkaloid SGD medium pass
BhybBhS80660620.1 Alkaloid SGD medium pass
BhybBhS90684180.1 Alkaloid SGD medium pass
BhybBhS90684190.1 Alkaloid SGD medium pass
BhybBhS90684190.2 Alkaloid SGD medium pass
BhybBhS90684190.3 Alkaloid SGD medium pass
BhybBhS90686760.1 Alkaloid SGD medium pass
BhybBhS90686770.1 Alkaloid SGD medium pass
BhybBhD10007300.1 Alkaloid SLS medium borderline
BhybBhD10025240.1 Alkaloid SLS medium borderline
BhybBhD10025340.1 Alkaloid SLS medium borderline
BhybBhD10026170.1 Alkaloid SLS medium borderline
BhybBhD10026190.1 Alkaloid SLS medium borderline
BhybBhD10049780.1 Alkaloid SLS medium borderline
BhybBhD10062290.1 Alkaloid SLS medium borderline
BhybBhD10066960.1 Alkaloid SLS medium borderline
BhybBhD10066970.1 Alkaloid SLS medium borderline
BhybBhD10067020.1 Alkaloid SLS medium borderline
BhybBhD10084530.1 Alkaloid SLS medium borderline
BhybBhD10084560.1 Alkaloid SLS medium borderline
BhybBhD10084570.1 Alkaloid SLS medium borderline
BhybBhD10087180.1 Alkaloid SLS medium borderline
BhybBhD10087180.2 Alkaloid SLS medium borderline
BhybBhD10095680.1 Alkaloid SLS medium borderline
BhybBhD20113390.2 Alkaloid SLS medium borderline
BhybBhD20142770.1 Alkaloid SLS medium borderline
BhybBhD20142780.1 Alkaloid SLS medium borderline
BhybBhD20161730.1 Alkaloid SLS medium borderline
BhybBhD20166090.1 Alkaloid SLS medium borderline
BhybBhD20166090.2 Alkaloid SLS medium borderline
BhybBhD20166100.1 Alkaloid SLS medium borderline
BhybBhD20166120.1 Alkaloid SLS medium borderline
BhybBhD20166130.1 Alkaloid SLS medium borderline
BhybBhD20166140.1 Alkaloid SLS medium borderline
BhybBhD20166160.1 Alkaloid SLS medium borderline
BhybBhD20166170.1 Alkaloid SLS medium borderline
BhybBhD20166180.1 Alkaloid SLS medium borderline
BhybBhD20166200.1 Alkaloid SLS medium borderline
BhybBhD20166370.1 Alkaloid SLS medium borderline