PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3404
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
BhybBhD10003430.1 Rosmarinic Acid C4H low borderline
BhybBhD10007300.1 Rosmarinic Acid C4H low borderline
BhybBhD10008230.1 Rosmarinic Acid C4H low borderline
BhybBhD10008240.1 Rosmarinic Acid C4H low borderline
BhybBhD10008250.1 Rosmarinic Acid C4H low borderline
BhybBhD10009940.1 Rosmarinic Acid C4H medium pass
BhybBhD10011610.1 Rosmarinic Acid C4H low borderline
BhybBhD10012610.1 Rosmarinic Acid C4H low borderline
BhybBhD10014530.1 Rosmarinic Acid C4H low borderline
BhybBhD10015190.1 Rosmarinic Acid C4H low borderline
BhybBhD10019580.1 Rosmarinic Acid C4H medium pass
BhybBhD10020000.1 Rosmarinic Acid C4H medium pass
BhybBhD10020700.1 Rosmarinic Acid C4H low borderline
BhybBhD10022060.1 Rosmarinic Acid C4H low borderline
BhybBhD10022120.1 Rosmarinic Acid C4H low borderline
BhybBhD10022680.1 Rosmarinic Acid C4H low borderline
BhybBhD10025240.1 Rosmarinic Acid C4H low borderline
BhybBhD10025340.1 Rosmarinic Acid C4H low borderline
BhybBhD10026170.1 Rosmarinic Acid C4H low borderline
BhybBhD10026190.1 Rosmarinic Acid C4H low borderline
BhybBhD10028950.1 Rosmarinic Acid C4H low borderline
BhybBhD10028980.1 Rosmarinic Acid C4H low borderline
BhybBhD10032410.1 Rosmarinic Acid C4H low borderline
BhybBhD10037800.1 Rosmarinic Acid C4H medium pass
BhybBhD10039940.1 Rosmarinic Acid C4H medium pass
BhybBhD10040580.1 Rosmarinic Acid C4H low borderline
BhybBhD10043780.1 Rosmarinic Acid C4H low borderline
BhybBhD10048490.1 Rosmarinic Acid C4H medium pass
BhybBhD10049750.1 Rosmarinic Acid C4H low borderline
BhybBhD10049780.1 Rosmarinic Acid C4H low borderline
BhybBhD10050860.1 Rosmarinic Acid C4H low borderline
BhybBhD10050860.2 Rosmarinic Acid C4H low borderline
BhybBhD10050860.3 Rosmarinic Acid C4H medium pass
BhybBhD10050860.4 Rosmarinic Acid C4H medium pass
BhybBhD10050870.1 Rosmarinic Acid C4H low borderline
BhybBhD10050920.1 Rosmarinic Acid C4H low borderline
BhybBhD10051180.1 Rosmarinic Acid C4H low borderline
BhybBhD10066960.1 Rosmarinic Acid C4H low borderline
BhybBhD10066970.1 Rosmarinic Acid C4H low borderline
BhybBhD10067020.1 Rosmarinic Acid C4H low borderline
BhybBhD10069830.1 Rosmarinic Acid C4H low borderline
BhybBhD10077470.1 Rosmarinic Acid C4H low borderline
BhybBhD10077490.1 Rosmarinic Acid C4H medium pass
BhybBhD10084770.1 Rosmarinic Acid C4H low borderline
BhybBhD10087180.1 Rosmarinic Acid C4H low borderline
BhybBhD10087180.2 Rosmarinic Acid C4H low borderline
BhybBhD10093530.1 Rosmarinic Acid C4H low borderline
BhybBhD10094890.1 Rosmarinic Acid C4H low borderline
BhybBhD10100700.1 Rosmarinic Acid C4H low borderline
BhybBhD10102680.1 Rosmarinic Acid C4H low borderline