PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BhybBhS90680000.1 Alkaloid TDC low borderline
BhybBhD10003150.1 Alkaloid TRI/TRII medium pass
BhybBhD10005120.1 Alkaloid TRI/TRII medium pass
BhybBhD10005120.2 Alkaloid TRI/TRII medium pass
BhybBhD10010980.1 Alkaloid TRI/TRII medium pass
BhybBhD10017370.1 Alkaloid TRI/TRII low borderline
BhybBhD10022330.1 Alkaloid TRI/TRII low borderline
BhybBhD10023680.1 Alkaloid TRI/TRII medium pass
BhybBhD10024130.1 Alkaloid TRI/TRII medium pass
BhybBhD10029570.1 Alkaloid TRI/TRII medium pass
BhybBhD10043580.1 Alkaloid TRI/TRII medium pass
BhybBhD10062880.1 Alkaloid TRI/TRII medium pass
BhybBhD10062900.1 Alkaloid TRI/TRII medium pass
BhybBhD10089240.1 Alkaloid TRI/TRII medium pass
BhybBhD10091850.1 Alkaloid TRI/TRII medium pass
BhybBhD10091860.1 Alkaloid TRI/TRII medium pass
BhybBhD10091870.1 Alkaloid TRI/TRII medium pass
BhybBhD20117190.1 Alkaloid TRI/TRII low borderline
BhybBhD20152380.1 Alkaloid TRI/TRII medium pass
BhybBhD20155380.1 Alkaloid TRI/TRII low borderline
BhybBhD20186760.1 Alkaloid TRI/TRII medium pass
BhybBhD30220980.1 Alkaloid TRI/TRII medium pass
BhybBhD30251540.1 Alkaloid TRI/TRII medium pass
BhybBhD40287590.1 Alkaloid TRI/TRII medium pass
BhybBhD40291800.1 Alkaloid TRI/TRII medium pass
BhybBhD40291810.1 Alkaloid TRI/TRII medium pass
BhybBhD40291820.1 Alkaloid TRI/TRII medium pass
BhybBhD40291840.1 Alkaloid TRI/TRII medium pass
BhybBhD40291850.1 Alkaloid TRI/TRII medium pass
BhybBhD40291850.2 Alkaloid TRI/TRII medium pass
BhybBhD40291860.1 Alkaloid TRI/TRII medium pass
BhybBhD40291870.1 Alkaloid TRI/TRII medium pass
BhybBhD40300960.1 Alkaloid TRI/TRII medium pass
BhybBhD40303710.1 Alkaloid TRI/TRII low borderline
BhybBhD40321540.1 Alkaloid TRI/TRII medium borderline
BhybBhD40321550.1 Alkaloid TRI/TRII medium borderline
BhybBhD40331780.1 Alkaloid TRI/TRII medium pass
BhybBhD40333290.1 Alkaloid TRI/TRII low borderline
BhybBhD40333290.2 Alkaloid TRI/TRII low borderline
BhybBhD50348750.1 Alkaloid TRI/TRII medium pass
BhybBhD50351110.1 Alkaloid TRI/TRII medium pass
BhybBhD50353720.1 Alkaloid TRI/TRII medium pass
BhybBhD50355690.1 Alkaloid TRI/TRII low borderline
BhybBhD50358090.1 Alkaloid TRI/TRII medium pass
BhybBhD50358100.1 Alkaloid TRI/TRII medium pass
BhybBhD50362190.1 Alkaloid TRI/TRII low borderline
BhybBhD50362220.1 Alkaloid TRI/TRII low borderline
BhybBhD50362220.2 Alkaloid TRI/TRII low borderline
BhybBhS100434430.1 Alkaloid TRI/TRII medium pass
BhybBhS100441490.1 Alkaloid TRI/TRII medium pass