PlantSME Plant secondary metabolism enzyme database

Brachypodium hybridum (brachypodium_hybridum)

Imported from atlas release summary for Brachypodium hybridum.

3885
Candidate Protein Records
3404
Pathway-Level Records
8036
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 954 20 BAHD (403) View species results
Phenylpropanoid pathway 766 11 POD (403) View species results
Alkaloid pathway 763 20 7DLGT (158) View species results
Flavonoid pathway 458 10 UFGT (324) View species results
Rosmarinic acid pathway 249 7 C4H (101) View species results
Steroid pathway 214 12 SMT1/SMT2/SMT3 (112) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2966 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 712 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BhybBhS10413650.1 Alkaloid 7DLGT medium pass
BhybBhS10414940.1 Alkaloid 7DLGT low borderline
BhybBhS10415330.1 Alkaloid 7DLGT low borderline
BhybBhS10415350.1 Alkaloid 7DLGT low borderline
BhybBhS10415360.1 Alkaloid 7DLGT medium pass
BhybBhS20453690.1 Alkaloid 7DLGT low borderline
BhybBhS20453860.1 Alkaloid 7DLGT low borderline
BhybBhS20461260.1 Alkaloid 7DLGT medium pass
BhybBhS20463220.1 Alkaloid 7DLGT medium pass
BhybBhS20464000.1 Alkaloid 7DLGT medium pass
BhybBhS20464010.1 Alkaloid 7DLGT medium pass
BhybBhS20473060.1 Alkaloid 7DLGT low borderline
BhybBhS20473610.1 Alkaloid 7DLGT low borderline
BhybBhS20473620.1 Alkaloid 7DLGT low borderline
BhybBhS20473630.1 Alkaloid 7DLGT low borderline
BhybBhS20473640.1 Alkaloid 7DLGT low borderline
BhybBhS20475070.1 Alkaloid 7DLGT low borderline
BhybBhS20477780.1 Alkaloid 7DLGT low borderline
BhybBhS20477820.1 Alkaloid 7DLGT medium pass
BhybBhS20477840.1 Alkaloid 7DLGT low borderline
BhybBhS20477850.1 Alkaloid 7DLGT medium pass
BhybBhS20477860.1 Alkaloid 7DLGT medium pass
BhybBhS20477880.1 Alkaloid 7DLGT medium pass
BhybBhS20481490.1 Alkaloid 7DLGT low borderline
BhybBhS20481500.1 Alkaloid 7DLGT low borderline
BhybBhS30487730.1 Alkaloid 7DLGT medium pass
BhybBhS30489490.1 Alkaloid 7DLGT medium pass
BhybBhS30489520.1 Alkaloid 7DLGT medium pass
BhybBhS30496460.1 Alkaloid 7DLGT low borderline
BhybBhS30501970.1 Alkaloid 7DLGT medium pass
BhybBhS30501970.2 Alkaloid 7DLGT medium pass
BhybBhS30515420.1 Alkaloid 7DLGT low borderline
BhybBhS30515430.1 Alkaloid 7DLGT low borderline
BhybBhS40523330.1 Alkaloid 7DLGT medium pass
BhybBhS40523340.1 Alkaloid 7DLGT medium pass
BhybBhS40523350.1 Alkaloid 7DLGT medium pass
BhybBhS40534370.1 Alkaloid 7DLGT low borderline
BhybBhS40537780.1 Alkaloid 7DLGT high pass
BhybBhS40537790.1 Alkaloid 7DLGT medium pass
BhybBhS40537800.1 Alkaloid 7DLGT high pass
BhybBhS40537800.2 Alkaloid 7DLGT high pass
BhybBhS40538160.1 Alkaloid 7DLGT medium pass
BhybBhS40546260.1 Alkaloid 7DLGT medium pass
BhybBhS40546580.1 Alkaloid 7DLGT medium pass
BhybBhS40548150.3 Alkaloid 7DLGT low borderline
BhybBhS40548460.1 Alkaloid 7DLGT low borderline
BhybBhS40548550.1 Alkaloid 7DLGT low borderline
BhybBhS40548560.1 Alkaloid 7DLGT medium pass
BhybBhS40548780.1 Alkaloid 7DLGT medium pass
BhybBhS40548790.1 Alkaloid 7DLGT low borderline