PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

4298
Candidate Protein Records
3334
Pathway-Level Records
8339
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Protein/Isoform Record Pathway Family Confidence Status Best Target
BjunB05G0024440 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
BjunB05G0025510 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
BjunB05G0027240 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
BjunB05G0031940 Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
BjunB05G0038240 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
BjunB05G0038260 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
BjunB06G0005040 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
BjunB06G0012290 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
BjunB07G0013200 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
BjunB08G0009000 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
BjunContig12320005290 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
BjunContig2870022680 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
BjunContig63970042640 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
BjunContig71_869334_18815850046810 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
BjunContig71_869334_18815850046820 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
BjunContig71_869334_18815850046830 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
BjunSuper_scaffold_171_1_458755_415295_4587550059370 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
BjunSuper_scaffold_171_1_458755_415295_4587550059380 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
BjunSuper_scaffold_750071360 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
BjunSuper_scaffold_750071870 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH