PlantSME Plant secondary metabolism enzyme database

Brassica nigra (brassica_nigra)

Imported from atlas release summary for Brassica nigra.

2566
Candidate Protein Records
2043
Pathway-Level Records
5164
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 641 19 BAHD (288) View species results
Phenylpropanoid pathway 428 12 POD (188) View species results
Alkaloid pathway 409 20 7DLGT (76) View species results
Flavonoid pathway 260 12 UFGT (169) View species results
Rosmarinic acid pathway 180 7 C4H (80) View species results
Steroid pathway 125 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2026 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 423 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BnigB3G0005490.1 Steroid DWF4/CYP90B1 low borderline
BnigB3G0009270.1 Steroid DWF4/CYP90B1 medium borderline
BnigB3G0027210.1 Steroid DWF4/CYP90B1 low borderline
BnigB3G0038550.1 Steroid DWF4/CYP90B1 low borderline
BnigB3G0040090.1 Steroid DWF4/CYP90B1 low borderline
BnigB3G0042870.1 Steroid DWF4/CYP90B1 low borderline
BnigB3G0042880.1 Steroid DWF4/CYP90B1 low borderline
BnigB3G0054070.1 Steroid DWF4/CYP90B1 low borderline
BnigB3G0054400.1 Steroid DWF4/CYP90B1 medium borderline
BnigB4G0004500.1 Steroid DWF4/CYP90B1 low borderline
BnigB4G0014220.1 Steroid DWF4/CYP90B1 low borderline
BnigB4G0014250.1 Steroid DWF4/CYP90B1 low borderline
BnigB4G0016510.1 Steroid DWF4/CYP90B1 low borderline
BnigB4G0018750.1 Steroid DWF4/CYP90B1 low borderline
BnigB4G0037370.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0009300.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0009310.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0009340.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0009350.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0009360.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0009370.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0014850.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0020020.1 Steroid DWF4/CYP90B1 medium borderline
BnigB5G0021760.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0027890.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0028330.1 Steroid DWF4/CYP90B1 medium borderline
BnigB5G0037580.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0045700.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0048280.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0050160.1 Steroid DWF4/CYP90B1 low borderline
BnigB5G0050170.1 Steroid DWF4/CYP90B1 medium borderline
BnigB5G0050180.1 Steroid DWF4/CYP90B1 medium borderline
BnigB6G0011920.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0016720.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0017030.1 Steroid DWF4/CYP90B1 medium borderline
BnigB6G0018660.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0032790.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0032820.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0032830.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0032840.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0032850.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0032860.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0032870.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0033810.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0033820.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0033830.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0034230.1 Steroid DWF4/CYP90B1 medium borderline
BnigB6G0035470.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0035990.1 Steroid DWF4/CYP90B1 low borderline
BnigB6G0036120.1 Steroid DWF4/CYP90B1 low borderline