PlantSME Plant secondary metabolism enzyme database

Citrus clementina (citrus_clementina)

Imported from atlas release summary for Citrus clementina.

2385
Candidate Protein Records
1991
Pathway-Level Records
4984
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 543 19 BAHD (230) View species results
Alkaloid pathway 494 23 7DLGT (91) View species results
Phenylpropanoid pathway 395 11 POD (123) View species results
Flavonoid pathway 251 9 UFGT (153) View species results
Rosmarinic acid pathway 190 7 C4H (77) View species results
Steroid pathway 118 11 CAS (43) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1987 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 346 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Cclescaffold_30074710.1 Phenylpropanoid COMT medium pass
Cclescaffold_30074720.1 Phenylpropanoid COMT medium pass
Cclescaffold_30074730.1 Phenylpropanoid COMT medium pass
Cclescaffold_30074740.1 Phenylpropanoid COMT medium pass
Cclescaffold_30074750.1 Phenylpropanoid COMT medium pass
Cclescaffold_30074760.1 Phenylpropanoid COMT medium pass
Cclescaffold_30075600.1 Phenylpropanoid COMT medium pass
Cclescaffold_30081030.1 Phenylpropanoid COMT medium pass
Cclescaffold_30081040.1 Phenylpropanoid COMT medium pass
Cclescaffold_30086600.1 Phenylpropanoid COMT medium pass
Cclescaffold_30086640.1 Phenylpropanoid COMT medium pass
Cclescaffold_30087400.1 Phenylpropanoid COMT medium pass
Cclescaffold_30087410.1 Phenylpropanoid COMT medium pass
Cclescaffold_30087420.1 Phenylpropanoid COMT medium pass
Cclescaffold_30087420.2 Phenylpropanoid COMT medium pass
Cclescaffold_30087420.3 Phenylpropanoid COMT medium pass
Cclescaffold_30087420.4 Phenylpropanoid COMT medium pass
Cclescaffold_30087430.1 Phenylpropanoid COMT medium pass
Cclescaffold_30087440.1 Phenylpropanoid COMT medium pass
Cclescaffold_30087440.2 Phenylpropanoid COMT medium pass
Cclescaffold_30087440.3 Phenylpropanoid COMT medium pass
Cclescaffold_30087450.1 Phenylpropanoid COMT medium pass
Cclescaffold_30087470.1 Phenylpropanoid COMT medium pass
Cclescaffold_30087480.1 Phenylpropanoid COMT medium pass
Cclescaffold_30087480.2 Phenylpropanoid COMT medium pass
Cclescaffold_30087480.3 Phenylpropanoid COMT medium pass
Cclescaffold_30092600.1 Phenylpropanoid COMT low borderline
Cclescaffold_30092600.2 Phenylpropanoid COMT low borderline
Cclescaffold_30097630.1 Phenylpropanoid COMT medium pass
Cclescaffold_30097640.1 Phenylpropanoid COMT medium pass
Cclescaffold_40108200.1 Phenylpropanoid COMT medium pass
Cclescaffold_40108240.1 Phenylpropanoid COMT medium pass
Cclescaffold_40108240.2 Phenylpropanoid COMT medium pass
Cclescaffold_40108240.3 Phenylpropanoid COMT medium pass
Cclescaffold_40108270.1 Phenylpropanoid COMT medium pass
Cclescaffold_40108320.1 Phenylpropanoid COMT medium pass
Cclescaffold_40108320.2 Phenylpropanoid COMT medium pass
Cclescaffold_40108330.1 Phenylpropanoid COMT medium pass
Cclescaffold_40108330.2 Phenylpropanoid COMT medium pass
Cclescaffold_40109000.1 Phenylpropanoid COMT medium pass
Cclescaffold_40109020.1 Phenylpropanoid COMT medium pass
Cclescaffold_40109020.2 Phenylpropanoid COMT medium pass
Cclescaffold_50130790.1 Phenylpropanoid COMT low borderline
Cclescaffold_50130820.1 Phenylpropanoid COMT low borderline
Cclescaffold_50131260.1 Phenylpropanoid COMT medium pass
Cclescaffold_50132110.1 Phenylpropanoid COMT medium pass
Cclescaffold_50132120.1 Phenylpropanoid COMT medium pass
Cclescaffold_50132140.1 Phenylpropanoid COMT medium pass
Cclescaffold_50132150.1 Phenylpropanoid COMT medium pass
Cclescaffold_50137570.1 Phenylpropanoid COMT medium pass