PlantSME Plant secondary metabolism enzyme database

Citrus clementina (citrus_clementina)

Imported from atlas release summary for Citrus clementina.

2385
Candidate Protein Records
1991
Pathway-Level Records
4984
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 543 19 BAHD (230) View species results
Alkaloid pathway 494 23 7DLGT (91) View species results
Phenylpropanoid pathway 395 11 POD (123) View species results
Flavonoid pathway 251 9 UFGT (153) View species results
Rosmarinic acid pathway 190 7 C4H (77) View species results
Steroid pathway 118 11 CAS (43) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1987 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 346 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Cclescaffold_50150140.1 Phenylpropanoid COMT medium pass
Cclescaffold_50150150.1 Phenylpropanoid COMT medium pass
Cclescaffold_50150170.1 Phenylpropanoid COMT medium pass
Cclescaffold_60159770.1 Phenylpropanoid COMT medium pass
Cclescaffold_60159780.1 Phenylpropanoid COMT medium pass
Cclescaffold_60160560.1 Phenylpropanoid COMT medium pass
Cclescaffold_60160570.1 Phenylpropanoid COMT medium pass
Cclescaffold_60162840.1 Phenylpropanoid COMT medium pass
Cclescaffold_60172520.1 Phenylpropanoid COMT medium pass
Cclescaffold_60178230.1 Phenylpropanoid COMT medium pass
Cclescaffold_70181220.1 Phenylpropanoid COMT medium pass
Cclescaffold_70199280.1 Phenylpropanoid COMT medium pass
Cclescaffold_70199290.1 Phenylpropanoid COMT medium pass
Cclescaffold_70199300.1 Phenylpropanoid COMT medium pass
Cclescaffold_7590201150.1 Phenylpropanoid COMT medium pass
Cclescaffold_80202210.1 Phenylpropanoid COMT medium pass
Cclescaffold_80212220.1 Phenylpropanoid COMT medium pass
Cclescaffold_90227760.1 Phenylpropanoid COMT low borderline
Cclescaffold_90227760.2 Phenylpropanoid COMT low borderline
Cclescaffold_90230360.1 Phenylpropanoid COMT medium pass
Cclescaffold_90230370.1 Phenylpropanoid COMT medium pass
Cclescaffold_90230380.1 Phenylpropanoid COMT medium pass
Cclescaffold_90232520.1 Phenylpropanoid COMT medium pass
Cclescaffold_90232540.1 Phenylpropanoid COMT medium pass
Cclescaffold_90232550.1 Phenylpropanoid COMT medium pass
Cclescaffold_90232560.1 Phenylpropanoid COMT medium pass
Cclescaffold_90234510.1 Phenylpropanoid COMT medium pass
Cclescaffold_90235020.1 Phenylpropanoid COMT medium pass
Cclescaffold_90235030.1 Phenylpropanoid COMT medium pass
Cclescaffold_90235040.1 Phenylpropanoid COMT medium pass
Cclescaffold_90235050.1 Phenylpropanoid COMT low borderline
Cclescaffold_90235620.1 Phenylpropanoid COMT medium pass
Cclescaffold_10018380.1 Phenylpropanoid CSE medium pass
Cclescaffold_10018380.2 Phenylpropanoid CSE medium pass
Cclescaffold_20034460.1 Phenylpropanoid CSE medium pass
Cclescaffold_20034660.1 Phenylpropanoid CSE medium pass
Cclescaffold_20034880.1 Phenylpropanoid CSE medium pass
Cclescaffold_20034890.1 Phenylpropanoid CSE medium pass
Cclescaffold_20041730.1 Phenylpropanoid CSE medium pass
Cclescaffold_20047040.1 Phenylpropanoid CSE medium pass
Cclescaffold_20050020.1 Phenylpropanoid CSE medium pass
Cclescaffold_20052490.1 Phenylpropanoid CSE medium pass
Cclescaffold_20053940.1 Phenylpropanoid CSE medium pass
Cclescaffold_20053950.1 Phenylpropanoid CSE medium pass
Cclescaffold_20053960.1 Phenylpropanoid CSE medium pass
Cclescaffold_20054150.1 Phenylpropanoid CSE medium pass
Cclescaffold_30063410.1 Phenylpropanoid CSE medium pass
Cclescaffold_30095120.1 Phenylpropanoid CSE medium pass
Cclescaffold_40107100.1 Phenylpropanoid CSE medium pass
Cclescaffold_40107110.1 Phenylpropanoid CSE medium pass