PlantSME Plant secondary metabolism enzyme database

Climacium americanum (climacium_americanum)

Imported from atlas release summary for Climacium americanum.

877
Candidate Protein Records
648
Pathway-Level Records
1636
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 173 10 POD (95) View species results
Terpenoid pathway 155 19 BAHD (57) View species results
Alkaloid pathway 119 18 NMT (27) View species results
Flavonoid pathway 88 8 UFGT (28) View species results
Rosmarinic acid pathway 73 7 C4H (30) View species results
Steroid pathway 40 12 CAS (17) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 600 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 109 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
CLame667840201360 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
CLame667840201600 Phenylpropanoid POD medium pass POD__00003__sp_A9PCL4_PRX2_POPTR
CLame667840201700 Phenylpropanoid POD medium pass POD__00026__sp_Q9XEX2_PRX2B_ARATH
CLame667840201710 Phenylpropanoid POD medium pass POD__00003__sp_A9PCL4_PRX2_POPTR
CLame668120208390 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
CLame668120208410 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
CLame668120208430 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
CLame668140209160 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
CLame668140209190 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
CLame668140209220 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
CLame668150209710 Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL
CLame668290213920 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
CLame668370216450 Phenylpropanoid POD medium pass POD__00017__sp_Q75SY5_PRXQ_GENTR
CLame668410218390 Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL
CLame668460219120 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
CLame668510221560 Phenylpropanoid POD low borderline POD__00018__sp_Q8H0V5_OCP3_ARATH
CLame668590223760 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
CLame668880230080 Phenylpropanoid POD medium pass POD__00011__sp_Q05431_APX1_ARATH
CLame669000232600 Phenylpropanoid POD medium pass POD__00002__sp_A5H8G4_PER1_MAIZE
CLame669080234820 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
CLame669200236040 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
CLame669220236560 Phenylpropanoid POD low borderline POD__00028__sp_Q9ZVD5_AGO4_ARATH
CLame669220236620 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
CLame730650241620 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI