PlantSME Plant secondary metabolism enzyme database

Gossypium hirsutum (gossypium_hirsutum)

Imported from atlas release summary for Gossypium hirsutum.

5656
Candidate Protein Records
4579
Pathway-Level Records
11461
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1367 21 BAHD (612) View species results
Alkaloid pathway 1056 25 NMT (183) View species results
Phenylpropanoid pathway 975 12 POD (389) View species results
Flavonoid pathway 507 11 UFGT (306) View species results
Rosmarinic acid pathway 363 7 C4H (130) View species results
Steroid pathway 311 12 CAS (159) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 4387 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 960 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
GhirA12G0003200.2 Phenylpropanoid C4H/CYP73A low borderline
GhirA12G0008250.1 Phenylpropanoid C4H/CYP73A low borderline
GhirA13G0004050.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirA13G0004070.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirA13G0006290.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirA13G0006330.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirA13G0006330.2 Phenylpropanoid C4H/CYP73A medium borderline
GhirA13G0006330.3 Phenylpropanoid C4H/CYP73A medium borderline
GhirD02G0003330.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD02G0003350.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD02G0003360.1 Phenylpropanoid C4H/CYP73A low borderline
GhirD02G0003360.2 Phenylpropanoid C4H/CYP73A low borderline
GhirD02G0003360.3 Phenylpropanoid C4H/CYP73A medium borderline
GhirD02G0003370.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD02G0003400.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD02G0003420.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD02G0003430.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD02G0003440.2 Phenylpropanoid C4H/CYP73A medium borderline
GhirD02G0003460.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD02G0003460.2 Phenylpropanoid C4H/CYP73A medium borderline
GhirD02G0003470.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD02G0003480.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD02G0003490.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD02G0003500.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD02G0003520.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD02G0003560.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD04G0021020.1 Phenylpropanoid C4H/CYP73A low borderline
GhirD04G0023110.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD06G0001360.1 Phenylpropanoid C4H/CYP73A low borderline
GhirD06G0001380.1 Phenylpropanoid C4H/CYP73A low borderline
GhirD06G0001400.1 Phenylpropanoid C4H/CYP73A low borderline
GhirD06G0001400.2 Phenylpropanoid C4H/CYP73A low borderline
GhirD06G0017750.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD07G0010860.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD08G0021320.1 Phenylpropanoid C4H/CYP73A low borderline
GhirD10G0023810.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD11G0015940.1 Phenylpropanoid C4H/CYP73A low borderline
GhirD11G0036870.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD13G0004260.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD13G0004270.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD13G0004300.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD13G0007370.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD13G0009900.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirD13G0009930.1 Phenylpropanoid C4H/CYP73A medium borderline
GhirA01G0007650.1 Phenylpropanoid CAD medium borderline
GhirA01G0007650.2 Phenylpropanoid CAD medium borderline
GhirA01G0007650.3 Phenylpropanoid CAD medium borderline
GhirA01G0007650.4 Phenylpropanoid CAD medium borderline
GhirA01G0007650.5 Phenylpropanoid CAD medium borderline
GhirA01G0020790.1 Phenylpropanoid CAD low borderline