PlantSME Plant secondary metabolism enzyme database

Gossypium hirsutum (gossypium_hirsutum)

Imported from atlas release summary for Gossypium hirsutum.

4579
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1367 21 BAHD (612) View species results
Alkaloid pathway 1056 25 NMT (183) View species results
Phenylpropanoid pathway 975 12 POD (389) View species results
Flavonoid pathway 507 11 UFGT (306) View species results
Rosmarinic acid pathway 363 7 C4H (130) View species results
Steroid pathway 311 12 CAS (159) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4387 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 960 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP51G1
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Gene Pathway Family Confidence Status
GhirA01G0009220.1 Steroid CYP51G1 medium borderline
GhirA01G0009260.1 Steroid CYP51G1 medium borderline
GhirA01G0009280.1 Steroid CYP51G1 medium borderline
GhirA01G0009310.1 Steroid CYP51G1 medium borderline
GhirA01G0009320.1 Steroid CYP51G1 medium borderline
GhirA01G0021660.1 Steroid CYP51G1 medium borderline
GhirA02G0000550.1 Steroid CYP51G1 medium borderline
GhirA03G0017240.1 Steroid CYP51G1 medium borderline
GhirA03G0017240.2 Steroid CYP51G1 medium borderline
GhirA10G0010730.1 Steroid CYP51G1 medium borderline
GhirA10G0026430.1 Steroid CYP51G1 medium borderline
GhirA10G0026430.2 Steroid CYP51G1 medium borderline
GhirA11G0005020.1 Steroid CYP51G1 medium borderline
GhirA11G0005020.2 Steroid CYP51G1 medium borderline
GhirA11G0019370.1 Steroid CYP51G1 medium borderline
GhirA12G0015600.1 Steroid CYP51G1 medium borderline
GhirA12G0020620.1 Steroid CYP51G1 medium borderline
GhirA12G0020640.1 Steroid CYP51G1 medium borderline
GhirA12G0020650.1 Steroid CYP51G1 medium borderline
GhirA13G0003150.1 Steroid CYP51G1 medium borderline
GhirD01G0009410.1 Steroid CYP51G1 medium borderline
GhirD01G0009440.1 Steroid CYP51G1 medium borderline
GhirD01G0009520.1 Steroid CYP51G1 medium borderline
GhirD01G0009530.1 Steroid CYP51G1 medium borderline
GhirD01G0023440.1 Steroid CYP51G1 medium borderline
GhirD02G0000590.1 Steroid CYP51G1 medium borderline
GhirD02G0020880.1 Steroid CYP51G1 medium borderline
GhirD07G0006750.1 Steroid CYP51G1 medium borderline
GhirD07G0006750.2 Steroid CYP51G1 medium borderline
GhirD10G0010530.1 Steroid CYP51G1 medium borderline
GhirD10G0024040.1 Steroid CYP51G1 medium borderline
GhirD10G0024060.1 Steroid CYP51G1 medium borderline
GhirD10G0024090.1 Steroid CYP51G1 medium borderline
GhirD10G0029550.1 Steroid CYP51G1 medium borderline
GhirD11G0005070.1 Steroid CYP51G1 medium borderline
GhirD11G0020420.1 Steroid CYP51G1 medium borderline
GhirD11G0033460.1 Steroid CYP51G1 low borderline
GhirD12G0016320.1 Steroid CYP51G1 medium borderline
GhirD12G0016930.1 Steroid CYP51G1 medium borderline
GhirD12G0021430.1 Steroid CYP51G1 medium borderline
GhirD12G0021440.1 Steroid CYP51G1 medium borderline
GhirD12G0029980.1 Steroid CYP51G1 medium borderline
GhirD13G0003410.1 Steroid CYP51G1 medium borderline