PlantSME Plant secondary metabolism enzyme database

Gossypium hirsutum (gossypium_hirsutum)

Imported from atlas release summary for Gossypium hirsutum.

4579
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1367 21 BAHD (612) View species results
Alkaloid pathway 1056 25 NMT (183) View species results
Phenylpropanoid pathway 975 12 POD (389) View species results
Flavonoid pathway 507 11 UFGT (306) View species results
Rosmarinic acid pathway 363 7 C4H (130) View species results
Steroid pathway 311 12 CAS (159) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4387 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 960 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
GhirA01G0009200.1 Steroid DWF4/CYP90B1 low borderline
GhirA01G0009300.1 Steroid DWF4/CYP90B1 low borderline
GhirA01G0021420.1 Steroid DWF4/CYP90B1 low borderline
GhirA02G0007340.3 Steroid DWF4/CYP90B1 medium borderline
GhirA02G0009400.1 Steroid DWF4/CYP90B1 low borderline
GhirA02G0013120.1 Steroid DWF4/CYP90B1 low borderline
GhirA02G0017450.1 Steroid DWF4/CYP90B1 low borderline
GhirA02G0017740.1 Steroid DWF4/CYP90B1 low borderline
GhirA02G0017770.1 Steroid DWF4/CYP90B1 low borderline
GhirA02G0017780.1 Steroid DWF4/CYP90B1 low borderline
GhirA03G0002140.1 Steroid DWF4/CYP90B1 low borderline
GhirA03G0002150.1 Steroid DWF4/CYP90B1 low borderline
GhirA03G0002170.1 Steroid DWF4/CYP90B1 low borderline
GhirA03G0002500.1 Steroid DWF4/CYP90B1 medium borderline
GhirA03G0002500.2 Steroid DWF4/CYP90B1 medium pass
GhirA03G0002500.3 Steroid DWF4/CYP90B1 medium borderline
GhirA03G0005890.1 Steroid DWF4/CYP90B1 medium borderline
GhirA03G0006890.1 Steroid DWF4/CYP90B1 low borderline
GhirA03G0009390.1 Steroid DWF4/CYP90B1 low borderline
GhirA03G0009430.1 Steroid DWF4/CYP90B1 low borderline
GhirA03G0014980.1 Steroid DWF4/CYP90B1 low borderline
GhirA04G0008470.1 Steroid DWF4/CYP90B1 low borderline
GhirA04G0015870.1 Steroid DWF4/CYP90B1 low borderline
GhirA05G0004340.1 Steroid DWF4/CYP90B1 low borderline
GhirA05G0007140.1 Steroid DWF4/CYP90B1 low borderline
GhirA05G0012170.1 Steroid DWF4/CYP90B1 medium borderline
GhirA05G0015820.1 Steroid DWF4/CYP90B1 low borderline
GhirA05G0015830.1 Steroid DWF4/CYP90B1 low borderline
GhirA05G0020680.1 Steroid DWF4/CYP90B1 medium borderline
GhirA05G0020920.1 Steroid DWF4/CYP90B1 low borderline
GhirA05G0020960.1 Steroid DWF4/CYP90B1 low borderline
GhirA05G0020970.1 Steroid DWF4/CYP90B1 low borderline
GhirA05G0021920.1 Steroid DWF4/CYP90B1 low borderline
GhirA05G0027960.1 Steroid DWF4/CYP90B1 low borderline
GhirA05G0027970.1 Steroid DWF4/CYP90B1 low borderline
GhirA05G0031360.1 Steroid DWF4/CYP90B1 low borderline
GhirA05G0038420.1 Steroid DWF4/CYP90B1 medium borderline
GhirA05G0040820.1 Steroid DWF4/CYP90B1 medium borderline
GhirA05G0043700.1 Steroid DWF4/CYP90B1 medium borderline
GhirA05G0043700.2 Steroid DWF4/CYP90B1 medium borderline
GhirA06G0001530.1 Steroid DWF4/CYP90B1 low borderline
GhirA06G0002390.1 Steroid DWF4/CYP90B1 low borderline
GhirA06G0015240.1 Steroid DWF4/CYP90B1 low borderline
GhirA06G0020000.1 Steroid DWF4/CYP90B1 medium borderline
GhirA07G0004820.1 Steroid DWF4/CYP90B1 low borderline
GhirA07G0009040.1 Steroid DWF4/CYP90B1 low borderline
GhirA07G0013730.1 Steroid DWF4/CYP90B1 low borderline
GhirA07G0013740.1 Steroid DWF4/CYP90B1 low borderline
GhirA07G0020410.1 Steroid DWF4/CYP90B1 medium borderline
GhirA07G0020500.1 Steroid DWF4/CYP90B1 medium borderline