PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1693
Candidate Protein Records
1226
Pathway-Level Records
2943
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
HvarHygva24200334660 Rosmarinic Acid C4H low borderline
HvarHygva24260335140 Rosmarinic Acid C4H low borderline
HvarHygva24260335180 Rosmarinic Acid C4H low borderline
HvarHygva24380336150 Rosmarinic Acid C4H low borderline
HvarHygva24380336160 Rosmarinic Acid C4H medium pass
HvarHygva24620339040 Rosmarinic Acid C4H medium pass
HvarHygva24690339620 Rosmarinic Acid C4H medium pass
HvarHygva2590351720 Rosmarinic Acid C4H low borderline
HvarHygva26580358870 Rosmarinic Acid C4H low borderline
HvarHygva26630359330 Rosmarinic Acid C4H low borderline
HvarHygva27290365820 Rosmarinic Acid C4H low borderline
HvarHygva27290365870 Rosmarinic Acid C4H low borderline
HvarHygva27380366480 Rosmarinic Acid C4H low borderline
HvarHygva27510367590 Rosmarinic Acid C4H medium pass
HvarHygva27990372100 Rosmarinic Acid C4H low borderline
HvarHygva28320375670 Rosmarinic Acid C4H medium pass
HvarHygva28430376460 Rosmarinic Acid C4H medium pass
HvarHygva29250383170 Rosmarinic Acid C4H medium pass
HvarHygva29390384380 Rosmarinic Acid C4H medium pass
HvarHygva29730388080 Rosmarinic Acid C4H medium pass
HvarHygva29950390070 Rosmarinic Acid C4H low borderline
HvarHygva30780398930 Rosmarinic Acid C4H low borderline
HvarHygva31040401680 Rosmarinic Acid C4H medium pass
HvarHygva31120403790 Rosmarinic Acid C4H low borderline
HvarHygva3600410320 Rosmarinic Acid C4H medium pass
HvarHygva3800412190 Rosmarinic Acid C4H medium pass
HvarHygva3810412280 Rosmarinic Acid C4H low borderline
HvarHygva3830412410 Rosmarinic Acid C4H low borderline
HvarHygva4000413970 Rosmarinic Acid C4H low borderline
HvarHygva510424930 Rosmarinic Acid C4H low borderline
HvarHygva5160425450 Rosmarinic Acid C4H low borderline
HvarHygva520425940 Rosmarinic Acid C4H medium pass
HvarHygva5460428810 Rosmarinic Acid C4H medium pass
HvarHygva5480428980 Rosmarinic Acid C4H low borderline
HvarHygva5650430820 Rosmarinic Acid C4H low borderline
HvarHygva5650430830 Rosmarinic Acid C4H low borderline
HvarHygva570431340 Rosmarinic Acid C4H low borderline
HvarHygva580432570 Rosmarinic Acid C4H low borderline
HvarHygva7070445980 Rosmarinic Acid C4H low borderline
HvarHygva8230456290 Rosmarinic Acid C4H low borderline
HvarHygva8280457000 Rosmarinic Acid C4H low borderline
HvarHygva8330457560 Rosmarinic Acid C4H medium pass
HvarHygva8410458600 Rosmarinic Acid C4H low borderline
HvarHygva8410458610 Rosmarinic Acid C4H low borderline
HvarHygva8410458620 Rosmarinic Acid C4H low borderline
HvarHygva9260466830 Rosmarinic Acid C4H low borderline
HvarHygva9640471230 Rosmarinic Acid C4H low borderline