PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
HvarHygva10350003670 Flavonoid IFS medium borderline
HvarHygva1080007490 Flavonoid IFS medium borderline
HvarHygva11040009910 Flavonoid IFS low borderline
HvarHygva11040009920 Flavonoid IFS low borderline
HvarHygva1355150035150 Flavonoid IFS low borderline
HvarHygva1370037270 Flavonoid IFS low borderline
HvarHygva1429860046220 Flavonoid IFS low borderline
HvarHygva14610052200 Flavonoid IFS low borderline
HvarHygva1476400055700 Flavonoid IFS medium borderline
HvarHygva1477530056100 Flavonoid IFS medium borderline
HvarHygva14810056560 Flavonoid IFS low borderline
HvarHygva1502330062320 Flavonoid IFS low borderline
HvarHygva1530230073300 Flavonoid IFS low borderline
HvarHygva1531820074330 Flavonoid IFS low borderline
HvarHygva1533460075000 Flavonoid IFS medium borderline
HvarHygva1533520075010 Flavonoid IFS low borderline
HvarHygva15420081220 Flavonoid IFS medium borderline
HvarHygva1545440085620 Flavonoid IFS low borderline
HvarHygva1553520096000 Flavonoid IFS low borderline
HvarHygva1556810102140 Flavonoid IFS low borderline
HvarHygva1560760109370 Flavonoid IFS medium borderline
HvarHygva1563960117870 Flavonoid IFS low borderline
HvarHygva1567890130970 Flavonoid IFS low borderline
HvarHygva1568570133340 Flavonoid IFS medium borderline
HvarHygva1568700133720 Flavonoid IFS low borderline
HvarHygva1570230138440 Flavonoid IFS low borderline
HvarHygva1571030141010 Flavonoid IFS low borderline
HvarHygva1573790151530 Flavonoid IFS medium borderline
HvarHygva1579590170230 Flavonoid IFS medium borderline
HvarHygva1580500173260 Flavonoid IFS low borderline
HvarHygva1582470179900 Flavonoid IFS low borderline
HvarHygva1583990184620 Flavonoid IFS medium borderline
HvarHygva1584660187400 Flavonoid IFS medium borderline
HvarHygva15920208600 Flavonoid IFS medium borderline
HvarHygva1636120215160 Flavonoid IFS low borderline
HvarHygva16630218330 Flavonoid IFS low borderline
HvarHygva17120225350 Flavonoid IFS low borderline
HvarHygva1725360234630 Flavonoid IFS medium borderline
HvarHygva1725370234650 Flavonoid IFS medium borderline
HvarHygva1731630239520 Flavonoid IFS low borderline
HvarHygva1731640239580 Flavonoid IFS low borderline
HvarHygva1769390269400 Flavonoid IFS medium borderline
HvarHygva1769400269480 Flavonoid IFS medium borderline
HvarHygva1770620270460 Flavonoid IFS low borderline
HvarHygva1770630270520 Flavonoid IFS low borderline
HvarHygva17930278670 Flavonoid IFS low borderline
HvarHygva18970287470 Flavonoid IFS medium borderline
HvarHygva1930290590 Flavonoid IFS low borderline
HvarHygva20000297360 Flavonoid IFS medium borderline
HvarHygva20430301030 Flavonoid IFS medium borderline