PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status Best Target
HvarHygva30700398140 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva30700398160 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva4750421540 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva860460580 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva860460590 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva9690471600 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva1160014920 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva11630015820 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva1468420053400 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva1477060055960 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva1551810093810 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HvarHygva1552350094570 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HvarHygva1556070100890 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HvarHygva1559120106260 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva1560930109800 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva1562540114050 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva1577480163170 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HvarHygva1578060165550 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva1580660173950 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva1580660173960 Rosmarinic Acid PAL medium pass PAL__00003__sp_P45724_PAL2_ARATH
HvarHygva1584430186780 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva1585740191140 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva2160311570 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva21900314210 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HvarHygva24690339660 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HvarHygva28240374960 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HvarHygva28320375710 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HvarHygva29990390870 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva30700398140 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva30700398160 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva4750421540 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva860460580 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva860460590 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
HvarHygva9690471600 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH