PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
HvarHygva1080007490 Alkaloid T3O medium borderline
HvarHygva11040009910 Alkaloid T3O low borderline
HvarHygva1355150035150 Alkaloid T3O medium borderline
HvarHygva1476400055700 Alkaloid T3O medium borderline
HvarHygva1490058520 Alkaloid T3O medium borderline
HvarHygva1490058530 Alkaloid T3O medium borderline
HvarHygva1530230073300 Alkaloid T3O medium pass
HvarHygva1531820074330 Alkaloid T3O low borderline
HvarHygva1545440085620 Alkaloid T3O medium pass
HvarHygva1546280086540 Alkaloid T3O medium borderline
HvarHygva1556810102140 Alkaloid T3O medium pass
HvarHygva1560760109370 Alkaloid T3O medium borderline
HvarHygva1571020140900 Alkaloid T3O medium borderline
HvarHygva1571030141010 Alkaloid T3O medium pass
HvarHygva1573690151280 Alkaloid T3O medium borderline
HvarHygva1575400156240 Alkaloid T3O medium borderline
HvarHygva1579590170230 Alkaloid T3O medium borderline
HvarHygva1579870170910 Alkaloid T3O medium borderline
HvarHygva1583990184620 Alkaloid T3O medium borderline
HvarHygva1586820195140 Alkaloid T3O medium borderline
HvarHygva1586970196080 Alkaloid T3O medium pass
HvarHygva1588850203510 Alkaloid T3O medium borderline
HvarHygva1636120215160 Alkaloid T3O medium pass
HvarHygva1636130215180 Alkaloid T3O medium pass
HvarHygva16630218330 Alkaloid T3O low borderline
HvarHygva1725360234630 Alkaloid T3O medium borderline
HvarHygva1725370234650 Alkaloid T3O medium borderline
HvarHygva1769390269400 Alkaloid T3O medium borderline
HvarHygva1769400269480 Alkaloid T3O medium borderline
HvarHygva1770620270460 Alkaloid T3O low borderline
HvarHygva1770630270520 Alkaloid T3O low borderline
HvarHygva20000297360 Alkaloid T3O medium borderline
HvarHygva21320309240 Alkaloid T3O medium pass
HvarHygva22090315790 Alkaloid T3O medium borderline
HvarHygva22830321230 Alkaloid T3O medium pass
HvarHygva23950332330 Alkaloid T3O medium pass
HvarHygva24620339040 Alkaloid T3O medium borderline
HvarHygva26630359330 Alkaloid T3O low borderline
HvarHygva27380366480 Alkaloid T3O medium borderline
HvarHygva27990372100 Alkaloid T3O medium pass
HvarHygva29250383170 Alkaloid T3O medium borderline
HvarHygva29390384380 Alkaloid T3O medium borderline
HvarHygva30320393520 Alkaloid T3O low borderline
HvarHygva3600410320 Alkaloid T3O medium borderline
HvarHygva3800412190 Alkaloid T3O medium borderline
HvarHygva4000413970 Alkaloid T3O medium borderline
HvarHygva510424930 Alkaloid T3O medium borderline
HvarHygva5160425450 Alkaloid T3O medium borderline
HvarHygva520425940 Alkaloid T3O medium borderline
HvarHygva5480428980 Alkaloid T3O low borderline