PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UFGT
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Gene Pathway Family Confidence Status
HvarHygva10260002830 Flavonoid UFGT medium pass
HvarHygva10260002840 Flavonoid UFGT medium pass
HvarHygva10350003720 Flavonoid UFGT medium pass
HvarHygva1122210011340 Flavonoid UFGT high pass
HvarHygva11690016290 Flavonoid UFGT medium pass
HvarHygva1378460038420 Flavonoid UFGT high pass
HvarHygva1386230040330 Flavonoid UFGT medium pass
HvarHygva1420044350 Flavonoid UFGT high pass
HvarHygva1471560054170 Flavonoid UFGT high pass
HvarHygva15150066720 Flavonoid UFGT medium pass
HvarHygva15150066740 Flavonoid UFGT medium pass
HvarHygva15220069590 Flavonoid UFGT medium pass
HvarHygva1537430077090 Flavonoid UFGT medium pass
HvarHygva15410080370 Flavonoid UFGT high pass
HvarHygva15410080390 Flavonoid UFGT high pass
HvarHygva1559870107140 Flavonoid UFGT high pass
HvarHygva1561070110370 Flavonoid UFGT low borderline
HvarHygva1563360116650 Flavonoid UFGT medium pass
HvarHygva1571850143810 Flavonoid UFGT high pass
HvarHygva1577330162420 Flavonoid UFGT medium pass
HvarHygva1577900164840 Flavonoid UFGT high pass
HvarHygva1578280166230 Flavonoid UFGT medium pass
HvarHygva1578280166250 Flavonoid UFGT medium pass
HvarHygva1578340166390 Flavonoid UFGT high pass
HvarHygva15810174840 Flavonoid UFGT medium pass
HvarHygva1586890195830 Flavonoid UFGT high pass
HvarHygva16230213460 Flavonoid UFGT high pass
HvarHygva1636090215090 Flavonoid UFGT high pass
HvarHygva1636110215150 Flavonoid UFGT high pass
HvarHygva1652190216890 Flavonoid UFGT high pass
HvarHygva1746380250830 Flavonoid UFGT medium pass
HvarHygva1746390250840 Flavonoid UFGT medium pass
HvarHygva1746400250850 Flavonoid UFGT medium pass
HvarHygva1746410250860 Flavonoid UFGT medium pass
HvarHygva17860277870 Flavonoid UFGT medium pass
HvarHygva17860277880 Flavonoid UFGT medium pass
HvarHygva18210280740 Flavonoid UFGT medium pass
HvarHygva18880286500 Flavonoid UFGT medium pass
HvarHygva20130298210 Flavonoid UFGT medium pass
HvarHygva2080304710 Flavonoid UFGT high pass
HvarHygva2080304720 Flavonoid UFGT high pass
HvarHygva23760330860 Flavonoid UFGT medium pass
HvarHygva25540348100 Flavonoid UFGT low borderline
HvarHygva27380366510 Flavonoid UFGT medium pass
HvarHygva27500367530 Flavonoid UFGT medium pass
HvarHygva3280406660 Flavonoid UFGT medium pass
HvarHygva3470408940 Flavonoid UFGT medium pass
HvarHygva4870422720 Flavonoid UFGT medium pass
HvarHygva5160425480 Flavonoid UFGT medium pass
HvarHygva5570429850 Flavonoid UFGT low borderline