PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1693
Candidate Protein Records
1226
Pathway-Level Records
2943
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
HvarHygva5670431180 Alkaloid STR low borderline
HvarHygva5890433490 Alkaloid STR low borderline
HvarHygva6230437100 Alkaloid STR medium pass
HvarHygva7690451510 Alkaloid STR low borderline
HvarHygva8480459030 Alkaloid STR low borderline
HvarHygva8490459200 Alkaloid STR low borderline
HvarHygva8840462790 Alkaloid STR low borderline
HvarHygva9450469060 Alkaloid STR medium pass
HvarHygva9510469760 Alkaloid STR low borderline
HvarHygva9600470990 Alkaloid STR medium pass
HvarHygva11040009920 Alkaloid T16H medium borderline
HvarHygva12310021500 Alkaloid T16H medium borderline
HvarHygva1563960117870 Alkaloid T16H medium borderline
HvarHygva1568930134300 Alkaloid T16H medium borderline
HvarHygva1569630136140 Alkaloid T16H medium borderline
HvarHygva15710140820 Alkaloid T16H medium borderline
HvarHygva1571670143180 Alkaloid T16H medium borderline
HvarHygva1582470179900 Alkaloid T16H medium borderline
HvarHygva2260318860 Alkaloid T16H medium borderline
HvarHygva31040401680 Alkaloid T16H medium borderline
HvarHygva3790412010 Alkaloid T16H medium borderline
HvarHygva8410458600 Alkaloid T16H low borderline
HvarHygva1080007490 Alkaloid T3O medium borderline
HvarHygva11040009910 Alkaloid T3O low borderline
HvarHygva1355150035150 Alkaloid T3O medium borderline
HvarHygva1476400055700 Alkaloid T3O medium borderline
HvarHygva1490058520 Alkaloid T3O medium borderline
HvarHygva1490058530 Alkaloid T3O medium borderline
HvarHygva1530230073300 Alkaloid T3O medium pass
HvarHygva1531820074330 Alkaloid T3O low borderline
HvarHygva1545440085620 Alkaloid T3O medium pass
HvarHygva1546280086540 Alkaloid T3O medium borderline
HvarHygva1556810102140 Alkaloid T3O medium pass
HvarHygva1560760109370 Alkaloid T3O medium borderline
HvarHygva1571020140900 Alkaloid T3O medium borderline
HvarHygva1571030141010 Alkaloid T3O medium pass
HvarHygva1573690151280 Alkaloid T3O medium borderline
HvarHygva1575400156240 Alkaloid T3O medium borderline
HvarHygva1579590170230 Alkaloid T3O medium borderline
HvarHygva1579870170910 Alkaloid T3O medium borderline
HvarHygva1583990184620 Alkaloid T3O medium borderline
HvarHygva1586820195140 Alkaloid T3O medium borderline
HvarHygva1586970196080 Alkaloid T3O medium pass
HvarHygva1588850203510 Alkaloid T3O medium borderline
HvarHygva1636120215160 Alkaloid T3O medium pass
HvarHygva1636130215180 Alkaloid T3O medium pass
HvarHygva16630218330 Alkaloid T3O low borderline
HvarHygva1725360234630 Alkaloid T3O medium borderline
HvarHygva1725370234650 Alkaloid T3O medium borderline
HvarHygva1769390269400 Alkaloid T3O medium borderline