PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1693
Candidate Protein Records
1226
Pathway-Level Records
2943
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
HvarHygva1769400269480 Alkaloid T3O medium borderline
HvarHygva1770620270460 Alkaloid T3O low borderline
HvarHygva1770630270520 Alkaloid T3O low borderline
HvarHygva20000297360 Alkaloid T3O medium borderline
HvarHygva21320309240 Alkaloid T3O medium pass
HvarHygva22090315790 Alkaloid T3O medium borderline
HvarHygva22830321230 Alkaloid T3O medium pass
HvarHygva23950332330 Alkaloid T3O medium pass
HvarHygva24620339040 Alkaloid T3O medium borderline
HvarHygva26630359330 Alkaloid T3O low borderline
HvarHygva27380366480 Alkaloid T3O medium borderline
HvarHygva27990372100 Alkaloid T3O medium pass
HvarHygva29250383170 Alkaloid T3O medium borderline
HvarHygva29390384380 Alkaloid T3O medium borderline
HvarHygva30320393520 Alkaloid T3O low borderline
HvarHygva3600410320 Alkaloid T3O medium borderline
HvarHygva3800412190 Alkaloid T3O medium borderline
HvarHygva4000413970 Alkaloid T3O medium borderline
HvarHygva510424930 Alkaloid T3O medium borderline
HvarHygva5160425450 Alkaloid T3O medium borderline
HvarHygva520425940 Alkaloid T3O medium borderline
HvarHygva5480428980 Alkaloid T3O low borderline
HvarHygva570431340 Alkaloid T3O medium pass
HvarHygva7070445980 Alkaloid T3O medium borderline
HvarHygva8280457000 Alkaloid T3O medium pass
HvarHygva8400458480 Alkaloid T3O low borderline
HvarHygva9260466830 Alkaloid T3O low borderline
HvarHygva1350034620 Alkaloid TDC low borderline
HvarHygva1491380058780 Alkaloid TDC low borderline
HvarHygva1521160069100 Alkaloid TDC low borderline
HvarHygva1557570103110 Alkaloid TDC low borderline
HvarHygva1566760126640 Alkaloid TDC low borderline
HvarHygva1575690157400 Alkaloid TDC low borderline
HvarHygva1583610183820 Alkaloid TDC medium borderline
HvarHygva16190213100 Alkaloid TDC low borderline
HvarHygva18800285540 Alkaloid TDC low borderline
HvarHygva21740312730 Alkaloid TDC low borderline
HvarHygva13980042160 Alkaloid TRI/TRII medium pass
HvarHygva1455870051460 Alkaloid TRI/TRII medium pass
HvarHygva1480440056520 Alkaloid TRI/TRII medium pass
HvarHygva15070063750 Alkaloid TRI/TRII medium pass
HvarHygva1512300065870 Alkaloid TRI/TRII low borderline
HvarHygva15380077810 Alkaloid TRI/TRII low borderline
HvarHygva1539680079070 Alkaloid TRI/TRII low borderline
HvarHygva1555180099030 Alkaloid TRI/TRII low borderline
HvarHygva1560570108840 Alkaloid TRI/TRII medium pass
HvarHygva1565970122730 Alkaloid TRI/TRII low borderline
HvarHygva1566270124170 Alkaloid TRI/TRII medium pass
HvarHygva1573630150980 Alkaloid TRI/TRII low borderline
HvarHygva1574330152500 Alkaloid TRI/TRII medium pass