PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1693
Candidate Protein Records
1226
Pathway-Level Records
2943
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
HvarHygva15890204170 Alkaloid TRI/TRII low borderline
HvarHygva16390215490 Alkaloid TRI/TRII medium pass
HvarHygva17070224100 Alkaloid TRI/TRII low borderline
HvarHygva1740000245430 Alkaloid TRI/TRII low borderline
HvarHygva1740010245480 Alkaloid TRI/TRII low borderline
HvarHygva1744960249880 Alkaloid TRI/TRII medium pass
HvarHygva1744970249910 Alkaloid TRI/TRII medium pass
HvarHygva17640264570 Alkaloid TRI/TRII low borderline
HvarHygva18270281030 Alkaloid TRI/TRII medium pass
HvarHygva18980287530 Alkaloid TRI/TRII medium pass
HvarHygva19320290820 Alkaloid TRI/TRII medium pass
HvarHygva21080306910 Alkaloid TRI/TRII medium pass
HvarHygva21150307910 Alkaloid TRI/TRII medium pass
HvarHygva22160316130 Alkaloid TRI/TRII low borderline
HvarHygva23560328800 Alkaloid TRI/TRII low borderline
HvarHygva25000343500 Alkaloid TRI/TRII medium pass
HvarHygva25000343530 Alkaloid TRI/TRII low borderline
HvarHygva260352720 Alkaloid TRI/TRII low borderline
HvarHygva260352730 Alkaloid TRI/TRII low borderline
HvarHygva26510358010 Alkaloid TRI/TRII low borderline
HvarHygva28500376850 Alkaloid TRI/TRII low borderline
HvarHygva29730388100 Alkaloid TRI/TRII medium pass
HvarHygva30230392950 Alkaloid TRI/TRII medium pass
HvarHygva3830412370 Alkaloid TRI/TRII low borderline
HvarHygva8230456270 Alkaloid TRI/TRII medium pass
HvarHygva8370458160 Alkaloid TRI/TRII medium pass
HvarHygva8760461690 Alkaloid TRI/TRII medium pass
HvarHygva1578570167400 Alkaloid TYDC_DDC medium borderline
HvarHygva1583610183810 Alkaloid TYDC_DDC medium borderline
HvarHygva24530338120 Alkaloid TYDC_DDC medium borderline
HvarHygva27670369090 Alkaloid TYDC_DDC medium borderline
HvarHygva6510440070 Alkaloid TYDC_DDC medium borderline
HvarHygva21970314810 Alkaloid XMT_MXMT_DXMT low borderline
HvarHygva10370003860 Flavonoid 4CL medium pass
HvarHygva1080007520 Flavonoid 4CL low borderline
HvarHygva13380033530 Flavonoid 4CL low borderline
HvarHygva1490058510 Flavonoid 4CL medium pass
HvarHygva15300073160 Flavonoid 4CL low borderline
HvarHygva1532170074440 Flavonoid 4CL medium pass
HvarHygva1536090076480 Flavonoid 4CL low borderline
HvarHygva1543000082440 Flavonoid 4CL medium pass
HvarHygva1545530085720 Flavonoid 4CL low borderline
HvarHygva1555500100110 Flavonoid 4CL medium pass
HvarHygva1556180101270 Flavonoid 4CL low borderline
HvarHygva1564920120550 Flavonoid 4CL medium pass
HvarHygva1567180128840 Flavonoid 4CL medium pass
HvarHygva1567180128850 Flavonoid 4CL medium pass
HvarHygva1575080154990 Flavonoid 4CL medium pass
HvarHygva1575600157200 Flavonoid 4CL medium pass
HvarHygva1575600157210 Flavonoid 4CL low borderline