PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Gene Pathway Family Confidence Status
HvarHygva7710451720 Flavonoid 4CL medium pass
HvarHygva7710451730 Flavonoid 4CL medium pass
HvarHygva8260456730 Flavonoid 4CL low borderline
HvarHygva8720461400 Flavonoid 4CL low borderline
HvarHygva950469510 Flavonoid 4CL low borderline
HvarHygva12090020020 Flavonoid ANR medium borderline
HvarHygva12780027960 Flavonoid ANR medium borderline
HvarHygva13350033310 Flavonoid ANR medium pass
HvarHygva1543910083860 Flavonoid ANR low borderline
HvarHygva1582460179840 Flavonoid ANR low borderline
HvarHygva1582720180910 Flavonoid ANR medium borderline
HvarHygva18680284260 Flavonoid ANR medium borderline
HvarHygva2030299710 Flavonoid ANR medium borderline
HvarHygva24280335480 Flavonoid ANR medium borderline
HvarHygva440417960 Flavonoid ANR medium borderline
HvarHygva7570450100 Flavonoid ANR medium borderline
HvarHygva1492760059420 Flavonoid ANS/LDOX medium borderline
HvarHygva1563340116590 Flavonoid ANS/LDOX low borderline
HvarHygva1574470152970 Flavonoid ANS/LDOX medium borderline
HvarHygva16530216960 Flavonoid ANS/LDOX low borderline
HvarHygva25270345380 Flavonoid ANS/LDOX medium borderline
HvarHygva5230426490 Flavonoid ANS/LDOX low borderline
HvarHygva7630450910 Flavonoid ANS/LDOX medium borderline
HvarHygva10480005050 Flavonoid C4H medium borderline
HvarHygva12830028770 Flavonoid C4H medium borderline
HvarHygva14070043130 Flavonoid C4H low borderline
HvarHygva1489850058440 Flavonoid C4H low borderline
HvarHygva1569630136140 Flavonoid C4H medium borderline
HvarHygva15710140820 Flavonoid C4H medium borderline
HvarHygva1769390269390 Flavonoid C4H low borderline
HvarHygva1769400269470 Flavonoid C4H low borderline
HvarHygva19550292800 Flavonoid C4H low borderline
HvarHygva2020298890 Flavonoid C4H medium borderline
HvarHygva20750304290 Flavonoid C4H low borderline
HvarHygva24260335180 Flavonoid C4H low borderline
HvarHygva27510367590 Flavonoid C4H medium borderline
HvarHygva31040401680 Flavonoid C4H medium borderline
HvarHygva8410458620 Flavonoid C4H low borderline
HvarHygva1554960098590 Flavonoid CHI medium pass
HvarHygva1578030165380 Flavonoid CHI low borderline
HvarHygva1585840191490 Flavonoid CHI low borderline
HvarHygva2480340890 Flavonoid CHI medium pass
HvarHygva25470347130 Flavonoid CHI medium pass
HvarHygva28530377110 Flavonoid CHI low borderline
HvarHygva330406850 Flavonoid CHI medium pass
HvarHygva4930423390 Flavonoid CHI medium pass
HvarHygva10740007200 Flavonoid CHS medium pass
HvarHygva10930008940 Flavonoid CHS medium pass
HvarHygva11010009800 Flavonoid CHS medium pass
HvarHygva11630015810 Flavonoid CHS medium pass