PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1226
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
HvarHygva29730388060 Steroid CAS medium pass
HvarHygva5610430460 Steroid CAS medium pass
HvarHygva8230456300 Steroid CAS medium pass
HvarHygva9450469030 Steroid CAS medium pass
HvarHygva10350003670 Steroid CPD/CYP90A1 medium borderline
HvarHygva1440048790 Steroid CPD/CYP90A1 medium borderline
HvarHygva1545090085440 Steroid CPD/CYP90A1 medium borderline
HvarHygva1566220124100 Steroid CPD/CYP90A1 medium borderline
HvarHygva1568700133720 Steroid CPD/CYP90A1 low borderline
HvarHygva1587850199370 Steroid CPD/CYP90A1 low borderline
HvarHygva1589850207080 Steroid CPD/CYP90A1 low borderline
HvarHygva17130226830 Steroid CPD/CYP90A1 medium borderline
HvarHygva20860305070 Steroid CPD/CYP90A1 medium borderline
HvarHygva20860305160 Steroid CPD/CYP90A1 medium borderline
HvarHygva30780398930 Steroid CPD/CYP90A1 medium borderline
HvarHygva1557210102490 Steroid CPI1 high pass
HvarHygva20250299290 Steroid CPI1 high pass
HvarHygva12310021500 Steroid CYP51G1 medium borderline
HvarHygva1571670143180 Steroid CYP51G1 medium borderline
HvarHygva1581660177440 Steroid CYP51G1 low borderline
HvarHygva1370037270 Steroid CYP90D1 low borderline
HvarHygva1477530056100 Steroid CYP90D1 low borderline
HvarHygva1490058520 Steroid CYP90D1 low borderline
HvarHygva1508950064650 Steroid CYP90D1 low borderline
HvarHygva1530230073300 Steroid CYP90D1 medium borderline
HvarHygva1554560097840 Steroid CYP90D1 low borderline
HvarHygva1571020140900 Steroid CYP90D1 low borderline
HvarHygva1586820195150 Steroid CYP90D1 low borderline
HvarHygva1588080200450 Steroid CYP90D1 low borderline
HvarHygva1588850203510 Steroid CYP90D1 low borderline
HvarHygva22830321230 Steroid CYP90D1 medium borderline
HvarHygva24620339040 Steroid CYP90D1 low borderline
HvarHygva30380393890 Steroid CYP90D1 low borderline
HvarHygva3830412410 Steroid CYP90D1 low borderline
HvarHygva520425940 Steroid CYP90D1 low borderline
HvarHygva1576550160450 Steroid DET2 low borderline
HvarHygva1723380233440 Steroid DET2 medium pass
HvarHygva1723400233510 Steroid DET2 medium pass
HvarHygva24990342870 Steroid DET2 low borderline
HvarHygva25730350170 Steroid DET2 low borderline
HvarHygva6900444190 Steroid DET2 medium pass
HvarHygva15390078600 Steroid DWF1 low borderline
HvarHygva1545870086080 Steroid DWF1 medium pass
HvarHygva1558590105090 Steroid DWF1 medium pass
HvarHygva1080007490 Steroid DWF4/CYP90B1 low borderline
HvarHygva11040009910 Steroid DWF4/CYP90B1 low borderline
HvarHygva11040009920 Steroid DWF4/CYP90B1 medium borderline
HvarHygva12460023820 Steroid DWF4/CYP90B1 medium borderline
HvarHygva1370037080 Steroid DWF4/CYP90B1 low borderline
HvarHygva1429860046220 Steroid DWF4/CYP90B1 low borderline