PlantSME Plant secondary metabolism enzyme database

Hygroamblystegium varium (hygroamblystegium_varium)

Imported from atlas release summary for Hygroamblystegium varium.

1693
Candidate Protein Records
1226
Pathway-Level Records
2943
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 327 11 POD (177) View species results
Terpenoid pathway 295 20 BAHD (119) View species results
Alkaloid pathway 225 20 NMT (45) View species results
Flavonoid pathway 162 9 UFGT (49) View species results
Rosmarinic acid pathway 126 7 C4H (40) View species results
Steroid pathway 91 12 CAS (38) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 917 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 223 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
HvarHygva15250070520 Rosmarinic Acid HPPR medium pass
HvarHygva1759370259790 Rosmarinic Acid HPPR medium pass
HvarHygva1759400259860 Rosmarinic Acid HPPR medium pass
HvarHygva1160014920 Rosmarinic Acid PAL high pass
HvarHygva11630015820 Rosmarinic Acid PAL high pass
HvarHygva1468420053400 Rosmarinic Acid PAL medium pass
HvarHygva1477060055960 Rosmarinic Acid PAL high pass
HvarHygva1551810093810 Rosmarinic Acid PAL high pass
HvarHygva1552350094570 Rosmarinic Acid PAL high pass
HvarHygva1556070100890 Rosmarinic Acid PAL high pass
HvarHygva1559120106260 Rosmarinic Acid PAL high pass
HvarHygva1560930109800 Rosmarinic Acid PAL high pass
HvarHygva1562540114050 Rosmarinic Acid PAL high pass
HvarHygva1577480163170 Rosmarinic Acid PAL high pass
HvarHygva1578060165550 Rosmarinic Acid PAL medium pass
HvarHygva1580660173950 Rosmarinic Acid PAL medium pass
HvarHygva1580660173960 Rosmarinic Acid PAL medium pass
HvarHygva1584430186780 Rosmarinic Acid PAL high pass
HvarHygva1585740191140 Rosmarinic Acid PAL high pass
HvarHygva2160311570 Rosmarinic Acid PAL medium pass
HvarHygva21900314210 Rosmarinic Acid PAL high pass
HvarHygva24690339660 Rosmarinic Acid PAL high pass
HvarHygva28240374960 Rosmarinic Acid PAL high pass
HvarHygva28320375710 Rosmarinic Acid PAL high pass
HvarHygva29990390870 Rosmarinic Acid PAL high pass
HvarHygva30700398140 Rosmarinic Acid PAL high pass
HvarHygva30700398160 Rosmarinic Acid PAL high pass
HvarHygva4750421540 Rosmarinic Acid PAL high pass
HvarHygva860460580 Rosmarinic Acid PAL high pass
HvarHygva860460590 Rosmarinic Acid PAL high pass
HvarHygva9690471600 Rosmarinic Acid PAL high pass
HvarHygva10060000610 Rosmarinic Acid RAS medium pass
HvarHygva10920008870 Rosmarinic Acid RAS medium pass
HvarHygva11480013600 Rosmarinic Acid RAS medium pass
HvarHygva15230069750 Rosmarinic Acid RAS medium pass
HvarHygva1528170071860 Rosmarinic Acid RAS low borderline
HvarHygva1539910079370 Rosmarinic Acid RAS low borderline
HvarHygva1561590112040 Rosmarinic Acid RAS low borderline
HvarHygva15630115210 Rosmarinic Acid RAS medium pass
HvarHygva1573590150860 Rosmarinic Acid RAS low borderline
HvarHygva1587240197280 Rosmarinic Acid RAS low borderline
HvarHygva1760050260530 Rosmarinic Acid RAS medium pass
HvarHygva1760060260630 Rosmarinic Acid RAS medium pass
HvarHygva22030315400 Rosmarinic Acid RAS medium pass
HvarHygva23060323870 Rosmarinic Acid RAS medium pass
HvarHygva23060323890 Rosmarinic Acid RAS low borderline
HvarHygva25320345910 Rosmarinic Acid RAS low borderline
HvarHygva26500357930 Rosmarinic Acid RAS low borderline
HvarHygva14300046400 Rosmarinic Acid TAT low borderline
HvarHygva1548320089040 Rosmarinic Acid TAT medium pass