PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

1891
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Iind03G0012390.1 Alkaloid 8HGO low borderline
Iind04G0007830.1 Alkaloid 8HGO low borderline
Iind06G0003800.1 Alkaloid 8HGO medium borderline
Iind06G0003810.1 Alkaloid 8HGO medium borderline
Iind06G0003810.2 Alkaloid 8HGO medium borderline
Iind06G0003810.3 Alkaloid 8HGO medium borderline
Iind06G0003810.4 Alkaloid 8HGO medium borderline
Iind06G0019480.1 Alkaloid 8HGO medium pass
Iind06G0032670.1 Alkaloid 8HGO low borderline
Iind03G0005530.1 Alkaloid ADC medium pass
Iind03G0005540.1 Alkaloid ADC medium pass
Iind05G0006800.1 Alkaloid ADC low borderline
Iind05G0036070.1 Alkaloid ADC medium pass
Iind00G0024010.1 Alkaloid BBE medium borderline
Iind00G0024030.1 Alkaloid BBE medium borderline
Iind00G0024040.1 Alkaloid BBE medium borderline
Iind00G0024040.2 Alkaloid BBE medium borderline
Iind00G0024050.1 Alkaloid BBE medium borderline
Iind00G0024090.1 Alkaloid BBE medium borderline
Iind00G0024140.1 Alkaloid BBE medium borderline
Iind00G0024150.1 Alkaloid BBE medium borderline
Iind00G0024180.1 Alkaloid BBE medium borderline
Iind00G0024190.1 Alkaloid BBE medium borderline
Iind00G0024200.1 Alkaloid BBE medium borderline
Iind00G0024210.1 Alkaloid BBE medium borderline
Iind00G0024240.1 Alkaloid BBE medium borderline
Iind00G0024250.1 Alkaloid BBE medium borderline
Iind00G0024260.1 Alkaloid BBE medium borderline
Iind00G0024300.1 Alkaloid BBE medium borderline
Iind00G0024310.1 Alkaloid BBE medium borderline
Iind00G0024320.1 Alkaloid BBE medium borderline
Iind00G0024330.1 Alkaloid BBE medium borderline
Iind00G0024340.1 Alkaloid BBE medium borderline
Iind00G0024360.1 Alkaloid BBE medium borderline
Iind01G0005390.1 Alkaloid BBE low borderline
Iind01G0035000.1 Alkaloid BBE medium borderline
Iind01G0035020.1 Alkaloid BBE medium borderline
Iind01G0035030.1 Alkaloid BBE medium borderline
Iind02G0010440.1 Alkaloid BBE medium borderline
Iind02G0019450.1 Alkaloid BBE medium borderline
Iind02G0022450.1 Alkaloid BBE medium borderline
Iind02G0022460.1 Alkaloid BBE medium borderline
Iind02G0027010.1 Alkaloid BBE medium borderline
Iind02G0027020.1 Alkaloid BBE medium borderline
Iind02G0027030.1 Alkaloid BBE medium borderline
Iind02G0027040.1 Alkaloid BBE medium borderline
Iind02G0027070.1 Alkaloid BBE medium borderline
Iind02G0027080.1 Alkaloid BBE medium borderline
Iind02G0027090.1 Alkaloid BBE medium borderline
Iind02G0027150.1 Alkaloid BBE medium borderline