PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

2398
Candidate Protein Records
1891
Pathway-Level Records
4449
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Iind02G0027210.1 Alkaloid BBE medium borderline
Iind02G0031030.1 Alkaloid BBE medium borderline
Iind02G0031920.1 Alkaloid BBE medium borderline
Iind04G0013380.1 Alkaloid BBE medium borderline
Iind04G0013400.1 Alkaloid BBE medium borderline
Iind05G0021480.1 Alkaloid BBE medium borderline
Iind05G0021490.1 Alkaloid BBE medium borderline
Iind05G0021500.1 Alkaloid BBE medium borderline
Iind05G0021510.1 Alkaloid BBE medium borderline
Iind05G0021520.1 Alkaloid BBE medium borderline
Iind05G0021530.1 Alkaloid BBE medium borderline
Iind05G0021540.1 Alkaloid BBE medium borderline
Iind05G0021550.1 Alkaloid BBE medium borderline
Iind05G0021570.1 Alkaloid BBE medium borderline
Iind06G0016100.1 Alkaloid BBE medium borderline
Iind06G0024880.1 Alkaloid BBE medium borderline
Iind06G0029360.1 Alkaloid BBE medium borderline
IindContig001120002090.1 Alkaloid BBE medium borderline
IindContig001570002870.1 Alkaloid BBE medium borderline
IindContig007500010130.1 Alkaloid BBE medium borderline
Iind00G0016530.3 Alkaloid CNMT low borderline
Iind00G0029000.2 Alkaloid CNMT low borderline
Iind00G0029000.3 Alkaloid CNMT low borderline
Iind00G0029000.4 Alkaloid CNMT low borderline
Iind01G0000580.1 Alkaloid CNMT low borderline
Iind02G0012330.1 Alkaloid CNMT low borderline
Iind04G0017370.1 Alkaloid CNMT low borderline
Iind05G0034480.1 Alkaloid CNMT medium borderline
Iind06G0011890.1 Alkaloid CNMT low borderline
Iind00G0004230.1 Alkaloid CODM/T6ODM medium borderline
Iind00G0005720.1 Alkaloid CODM/T6ODM medium borderline
Iind00G0025770.1 Alkaloid CODM/T6ODM medium borderline
Iind00G0025780.1 Alkaloid CODM/T6ODM medium borderline
Iind00G0025790.1 Alkaloid CODM/T6ODM medium borderline
Iind00G0033860.1 Alkaloid CODM/T6ODM medium borderline
Iind00G0033870.1 Alkaloid CODM/T6ODM medium borderline
Iind01G0002570.1 Alkaloid CODM/T6ODM medium borderline
Iind01G0002600.1 Alkaloid CODM/T6ODM medium borderline
Iind01G0002700.1 Alkaloid CODM/T6ODM medium borderline
Iind01G0004420.1 Alkaloid CODM/T6ODM medium borderline
Iind01G0006050.1 Alkaloid CODM/T6ODM medium borderline
Iind01G0010570.1 Alkaloid CODM/T6ODM medium borderline
Iind01G0018010.1 Alkaloid CODM/T6ODM medium borderline
Iind01G0018010.2 Alkaloid CODM/T6ODM medium borderline
Iind01G0018010.3 Alkaloid CODM/T6ODM medium borderline
Iind01G0020920.1 Alkaloid CODM/T6ODM medium borderline
Iind01G0020930.1 Alkaloid CODM/T6ODM medium borderline
Iind01G0029740.1 Alkaloid CODM/T6ODM medium borderline
Iind01G0036650.1 Alkaloid CODM/T6ODM medium borderline
Iind01G0036680.1 Alkaloid CODM/T6ODM medium borderline