PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

2398
Candidate Protein Records
1891
Pathway-Level Records
4449
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Iind02G0017550.7 Steroid CYP90D1 medium borderline
Iind02G0017550.8 Steroid CYP90D1 medium borderline
Iind02G0026560.1 Steroid CYP90D1 low borderline
Iind02G0033070.1 Steroid CYP90D1 low borderline
Iind03G0008370.1 Steroid CYP90D1 low borderline
Iind03G0011070.1 Steroid CYP90D1 low borderline
Iind03G0019370.1 Steroid CYP90D1 low borderline
Iind03G0025790.1 Steroid CYP90D1 medium borderline
Iind03G0025790.2 Steroid CYP90D1 medium borderline
Iind04G0002040.2 Steroid CYP90D1 low borderline
Iind04G0002050.1 Steroid CYP90D1 low borderline
Iind05G0015170.1 Steroid CYP90D1 medium borderline
Iind05G0015170.2 Steroid CYP90D1 medium borderline
Iind05G0020330.1 Steroid CYP90D1 medium borderline
Iind05G0020330.3 Steroid CYP90D1 medium borderline
Iind05G0031060.1 Steroid CYP90D1 low borderline
Iind05G0033340.1 Steroid CYP90D1 low borderline
Iind05G0037500.1 Steroid CYP90D1 medium borderline
Iind06G0009390.1 Steroid CYP90D1 low borderline
Iind06G0027390.3 Steroid CYP90D1 medium borderline
Iind06G0030210.1 Steroid CYP90D1 low borderline
Iind06G0037680.1 Steroid CYP90D1 low borderline
IindContig009420016210.1 Steroid CYP90D1 low borderline
Iind04G0009960.1 Steroid DET2 medium pass
Iind06G0007470.1 Steroid DET2 low borderline
Iind06G0032290.1 Steroid DET2 low borderline
Iind02G0039220.1 Steroid DWF1 medium pass
Iind03G0019710.1 Steroid DWF1 medium pass
Iind03G0019710.2 Steroid DWF1 medium pass
Iind00G0007370.1 Steroid DWF4/CYP90B1 low borderline
Iind00G0008690.1 Steroid DWF4/CYP90B1 low borderline
Iind00G0009070.1 Steroid DWF4/CYP90B1 low borderline
Iind00G0009120.1 Steroid DWF4/CYP90B1 medium borderline
Iind00G0009130.1 Steroid DWF4/CYP90B1 medium borderline
Iind00G0013300.1 Steroid DWF4/CYP90B1 medium borderline
Iind00G0013300.2 Steroid DWF4/CYP90B1 medium borderline
Iind00G0013300.3 Steroid DWF4/CYP90B1 medium borderline
Iind00G0013300.4 Steroid DWF4/CYP90B1 medium borderline
Iind00G0013300.5 Steroid DWF4/CYP90B1 medium borderline
Iind00G0015750.1 Steroid DWF4/CYP90B1 low borderline
Iind00G0015760.1 Steroid DWF4/CYP90B1 low borderline
Iind00G0015770.1 Steroid DWF4/CYP90B1 low borderline
Iind00G0015770.2 Steroid DWF4/CYP90B1 low borderline
Iind00G0015780.1 Steroid DWF4/CYP90B1 low borderline
Iind00G0015780.2 Steroid DWF4/CYP90B1 low borderline
Iind00G0015790.1 Steroid DWF4/CYP90B1 low borderline
Iind00G0015800.1 Steroid DWF4/CYP90B1 low borderline
Iind00G0015810.1 Steroid DWF4/CYP90B1 low borderline
Iind00G0015820.1 Steroid DWF4/CYP90B1 low borderline
Iind00G0015850.1 Steroid DWF4/CYP90B1 low borderline