PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

2398
Candidate Protein Records
1891
Pathway-Level Records
4449
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Iind05G0023450.1 Rosmarinic Acid C4H medium pass
Iind05G0023460.1 Rosmarinic Acid C4H medium pass
Iind05G0023470.1 Rosmarinic Acid C4H low borderline
Iind05G0031060.1 Rosmarinic Acid C4H low borderline
Iind05G0032920.1 Rosmarinic Acid C4H low borderline
Iind05G0033340.1 Rosmarinic Acid C4H low borderline
Iind05G0037420.1 Rosmarinic Acid C4H low borderline
Iind05G0037500.1 Rosmarinic Acid C4H low borderline
Iind05G0039430.1 Rosmarinic Acid C4H low borderline
Iind05G0040380.1 Rosmarinic Acid C4H low borderline
Iind06G0006090.1 Rosmarinic Acid C4H low borderline
Iind06G0006560.1 Rosmarinic Acid C4H low borderline
Iind06G0006960.1 Rosmarinic Acid C4H low borderline
Iind06G0007760.1 Rosmarinic Acid C4H low borderline
Iind06G0011930.1 Rosmarinic Acid C4H low borderline
Iind06G0012500.1 Rosmarinic Acid C4H low borderline
Iind06G0012500.2 Rosmarinic Acid C4H low borderline
Iind06G0017530.1 Rosmarinic Acid C4H low borderline
Iind06G0018250.1 Rosmarinic Acid C4H low borderline
Iind06G0024610.1 Rosmarinic Acid C4H low borderline
Iind06G0024620.1 Rosmarinic Acid C4H low borderline
Iind06G0024640.1 Rosmarinic Acid C4H medium pass
Iind06G0024660.1 Rosmarinic Acid C4H low borderline
Iind06G0024680.1 Rosmarinic Acid C4H low borderline
Iind06G0027390.1 Rosmarinic Acid C4H low borderline
Iind06G0027390.3 Rosmarinic Acid C4H low borderline
Iind06G0029240.1 Rosmarinic Acid C4H low borderline
Iind06G0029890.1 Rosmarinic Acid C4H low borderline
Iind06G0030040.1 Rosmarinic Acid C4H low borderline
Iind06G0030210.1 Rosmarinic Acid C4H low borderline
Iind06G0030220.1 Rosmarinic Acid C4H medium pass
Iind06G0030230.1 Rosmarinic Acid C4H low borderline
Iind06G0030240.1 Rosmarinic Acid C4H medium pass
Iind06G0037680.1 Rosmarinic Acid C4H medium pass
Iind06G0037690.1 Rosmarinic Acid C4H medium pass
Iind06G0038630.1 Rosmarinic Acid C4H low borderline
IindContig000070000180.1 Rosmarinic Acid C4H low borderline
IindContig007180009450.1 Rosmarinic Acid C4H medium pass
IindContig007520010300.1 Rosmarinic Acid C4H low borderline
IindContig008370012470.1 Rosmarinic Acid C4H low borderline
IindContig009420016200.1 Rosmarinic Acid C4H low borderline
IindContig009420016210.1 Rosmarinic Acid C4H low borderline
IindContig009420016240.1 Rosmarinic Acid C4H medium pass
IindContig009420016250.1 Rosmarinic Acid C4H medium pass
IindContig009910017820.1 Rosmarinic Acid C4H low borderline
IindContig009990018180.1 Rosmarinic Acid C4H medium pass
IindContig009990018190.1 Rosmarinic Acid C4H medium pass
IindContig009990018200.1 Rosmarinic Acid C4H medium pass
IindContig009990018210.1 Rosmarinic Acid C4H medium pass
IindContig009990018220.1 Rosmarinic Acid C4H medium pass