PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

2398
Candidate Protein Records
1891
Pathway-Level Records
4449
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
IindContig010900021230.1 Rosmarinic Acid C4H low borderline
IindContig011130022050.1 Rosmarinic Acid C4H low borderline
Iind00G0000380.1 Rosmarinic Acid CPR low borderline
Iind00G0000380.2 Rosmarinic Acid CPR low borderline
Iind00G0000380.3 Rosmarinic Acid CPR low borderline
Iind03G0007470.1 Rosmarinic Acid CPR medium pass
Iind03G0007480.1 Rosmarinic Acid CPR low borderline
Iind03G0007530.1 Rosmarinic Acid CPR medium pass
Iind03G0036650.1 Rosmarinic Acid CPR medium pass
Iind05G0025780.1 Rosmarinic Acid CPR medium pass
Iind05G0025780.2 Rosmarinic Acid CPR medium pass
Iind05G0025800.1 Rosmarinic Acid CPR medium pass
Iind05G0025800.2 Rosmarinic Acid CPR medium pass
Iind05G0031540.1 Rosmarinic Acid CPR medium pass
Iind05G0031540.2 Rosmarinic Acid CPR medium pass
Iind05G0031540.3 Rosmarinic Acid CPR medium pass
Iind06G0028500.1 Rosmarinic Acid CPR medium pass
Iind06G0028500.2 Rosmarinic Acid CPR medium pass
Iind02G0011150.1 Rosmarinic Acid HPPR medium pass
Iind02G0011160.1 Rosmarinic Acid HPPR medium pass
Iind02G0011170.1 Rosmarinic Acid HPPR medium pass
Iind06G0000150.1 Rosmarinic Acid HPPR medium pass
Iind06G0035090.1 Rosmarinic Acid HPPR medium pass
Iind01G0003240.1 Rosmarinic Acid PAL medium pass
Iind03G0029070.1 Rosmarinic Acid PAL high pass
Iind03G0029070.2 Rosmarinic Acid PAL high pass
Iind04G0011110.1 Rosmarinic Acid PAL high pass
Iind06G0030190.1 Rosmarinic Acid PAL high pass
Iind00G0004940.1 Rosmarinic Acid RAS low borderline
Iind00G0021060.1 Rosmarinic Acid RAS low borderline
Iind01G0005890.1 Rosmarinic Acid RAS low borderline
Iind01G0005890.2 Rosmarinic Acid RAS low borderline
Iind01G0021350.2 Rosmarinic Acid RAS low borderline
Iind01G0022730.1 Rosmarinic Acid RAS medium pass
Iind02G0017960.1 Rosmarinic Acid RAS low borderline
Iind02G0017960.2 Rosmarinic Acid RAS low borderline
Iind02G0017960.3 Rosmarinic Acid RAS low borderline
Iind02G0024000.1 Rosmarinic Acid RAS medium pass
Iind03G0001960.1 Rosmarinic Acid RAS medium pass
Iind03G0003430.1 Rosmarinic Acid RAS low borderline
Iind03G0005080.1 Rosmarinic Acid RAS low borderline
Iind03G0015010.1 Rosmarinic Acid RAS low borderline
Iind04G0003070.1 Rosmarinic Acid RAS low borderline
Iind04G0003070.2 Rosmarinic Acid RAS low borderline
Iind04G0007440.1 Rosmarinic Acid RAS medium pass
Iind04G0031060.1 Rosmarinic Acid RAS low borderline
Iind05G0001260.1 Rosmarinic Acid RAS medium pass
Iind05G0025770.1 Rosmarinic Acid RAS low borderline
Iind05G0030390.1 Rosmarinic Acid RAS low borderline
Iind05G0030390.2 Rosmarinic Acid RAS low borderline